Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3070 |
Symbol | rpsI |
ID | 4605317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3648923 |
End bp | 3649315 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639782486 |
Product | 30S ribosomal protein S9 |
Protein accession | YP_928942 |
Protein GI | 119776202 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000352838 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.198807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTA CTCAGTACTA CGGCACTGGC CGTCGCAAAA CTTCTACCGC TCGCGTATTC GCTAAAGTAG GCAGCGGTAA CATCATCGTT AACAAGCGTC CTCTGGATGT TTATTTCGGT CGTGAGACTG CTCGTATGGT TGTTCGTCAG CCGCTCGAGC TGGTTGAAAT GACTGAAAAG CTGGACATCT ATGTGACTGT TAAGGGCGGT GGTATCACTG GCCAAGCCGG TGCCATCCGT CACGGTATCA CCCGCGCTCT GATGGAGCTG GACGAGTCTC TGCGTCCTAC TCTGCGTGCC GCTGGTTTCG TTACCCGTGA TGCCCGTCAG GTTGAGCGTA AGAAAGTTGG TCTGCGCAAA GCACGTCGTA GACCACAGTT CTCCAAGCGT TAA
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Protein sequence | MAATQYYGTG RRKTSTARVF AKVGSGNIIV NKRPLDVYFG RETARMVVRQ PLELVEMTEK LDIYVTVKGG GITGQAGAIR HGITRALMEL DESLRPTLRA AGFVTRDARQ VERKKVGLRK ARRRPQFSKR
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