Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3069 |
Symbol | |
ID | 4605316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3647279 |
End bp | 3648574 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782485 |
Product | adenylosuccinate synthetase |
Protein accession | YP_928941 |
Protein GI | 119776201 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00455582 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.136181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAA ACGTAGTTGT TCTCGGCACC CAATGGGGTG ACGAGGGAAA AGGTAAGATT GTCGACCTTC TCACTGAACA GGCAAAATAC GTAGTTCGTT ATCAGGGCGG CCACAACGCT GGTCACACTC TGGTAATCGA TGGTGTTAAA ACCGTTCTCC ATCTGATCCC CTCAGGCATC CTGCGCGATA ATGTGAAATG TATTATCGGT AACGGTGTTG TGCTGGCTCC AGACGCGCTG ATGAAAGAAA TCAGCATGCT CAAAGAGCGT GGCGTACCCG TTGAAGATCG CCTGCTGATC TCCGAAGCTT GTCCACTTAT CCTGCCGTTC CACTGTGCAG TGGATATCGC CCGTGAAAAG GCGCGCGGCA ACAAGGCTAT CGGTACCACT GGTCGTGGTA TTGGCCCTGC CTATGAGGAC AAGGTGTCAC GTCGCGGTCT GCGCGTGGGA GATCTGTTCA ATGCTGAACT CTTCGCCGAG AAACTCAAAG AAGTGATGAA GTATCACAAC TTCATGCTGA CTGAGTACTA TGGCGCCGAA GCCGTTGACT ATCAGACAAC CCTCGACGAT GCACTGGCAA TGGCCGACTA CCTCAAGTCT ATGTGCGTTG ACGTGACAGA AATGCTGGAT CAGGCCCGCA AAGCCGGTGA AAACATACTG TTCGAAGGTG CTCAGGGTAC ACTGCTGGAC ATCGACCACG GTACTTATCC GTTCGTGACT TCGTCCAACA CCACTGCTGG CGGCGTTGCA ACCGGAAGCG GTTTTGGTCC ATGTCATCTG GACTATGTGC TGGGTATCAT GAAGGCCTAC ACCACTCGCG TGGGTGCCGG TCCTTTCCCA ACTGAACTCG AGTGTGAAAT TGGTGACCAT CTGGGTACCA AGGGCCACGA GTTTGGTGCC ACCACTGGCC GTAAGCGTCG TCCAGGTTGG CTCGATGCTG TTGCCATGAA GCGTGCTATC CAGATCAACA GTCTGACAGG TATCTGTTTG ACCAAGTTGG ACGTGCTGGA CGGCCTGGAA GAAGTGAAGA TCTGTGTGGG TTATCAGCAG CCAGATGGCA CTGTTACCAC TGTGACTCCT CTTGCCGCTG AAGGTTATGA GCTGGTAACC CCAGTTTATG AAACCCTGCC AGGTTGGAGC GAGAACACCT TCGGTGTGAC TTCCATGGAT CAGCTGCCAC AGGCGGCCGT TAATTACATC AAACGTATCG AAGAGATTTT GGAGACGCCA ATCGACATCA TCTCTACCGG TCCGGATAGG AACGAGACCT TTATCCGGGT CAGTCCGTTT AACTGA
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Protein sequence | MGKNVVVLGT QWGDEGKGKI VDLLTEQAKY VVRYQGGHNA GHTLVIDGVK TVLHLIPSGI LRDNVKCIIG NGVVLAPDAL MKEISMLKER GVPVEDRLLI SEACPLILPF HCAVDIAREK ARGNKAIGTT GRGIGPAYED KVSRRGLRVG DLFNAELFAE KLKEVMKYHN FMLTEYYGAE AVDYQTTLDD ALAMADYLKS MCVDVTEMLD QARKAGENIL FEGAQGTLLD IDHGTYPFVT SSNTTAGGVA TGSGFGPCHL DYVLGIMKAY TTRVGAGPFP TELECEIGDH LGTKGHEFGA TTGRKRRPGW LDAVAMKRAI QINSLTGICL TKLDVLDGLE EVKICVGYQQ PDGTVTTVTP LAAEGYELVT PVYETLPGWS ENTFGVTSMD QLPQAAVNYI KRIEEILETP IDIISTGPDR NETFIRVSPF N
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