Gene Sama_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3069 
Symbol 
ID4605316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3647279 
End bp3648574 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content53% 
IMG OID639782485 
Productadenylosuccinate synthetase 
Protein accessionYP_928941 
Protein GI119776201 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00455582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.136181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAA ACGTAGTTGT TCTCGGCACC CAATGGGGTG ACGAGGGAAA AGGTAAGATT 
GTCGACCTTC TCACTGAACA GGCAAAATAC GTAGTTCGTT ATCAGGGCGG CCACAACGCT
GGTCACACTC TGGTAATCGA TGGTGTTAAA ACCGTTCTCC ATCTGATCCC CTCAGGCATC
CTGCGCGATA ATGTGAAATG TATTATCGGT AACGGTGTTG TGCTGGCTCC AGACGCGCTG
ATGAAAGAAA TCAGCATGCT CAAAGAGCGT GGCGTACCCG TTGAAGATCG CCTGCTGATC
TCCGAAGCTT GTCCACTTAT CCTGCCGTTC CACTGTGCAG TGGATATCGC CCGTGAAAAG
GCGCGCGGCA ACAAGGCTAT CGGTACCACT GGTCGTGGTA TTGGCCCTGC CTATGAGGAC
AAGGTGTCAC GTCGCGGTCT GCGCGTGGGA GATCTGTTCA ATGCTGAACT CTTCGCCGAG
AAACTCAAAG AAGTGATGAA GTATCACAAC TTCATGCTGA CTGAGTACTA TGGCGCCGAA
GCCGTTGACT ATCAGACAAC CCTCGACGAT GCACTGGCAA TGGCCGACTA CCTCAAGTCT
ATGTGCGTTG ACGTGACAGA AATGCTGGAT CAGGCCCGCA AAGCCGGTGA AAACATACTG
TTCGAAGGTG CTCAGGGTAC ACTGCTGGAC ATCGACCACG GTACTTATCC GTTCGTGACT
TCGTCCAACA CCACTGCTGG CGGCGTTGCA ACCGGAAGCG GTTTTGGTCC ATGTCATCTG
GACTATGTGC TGGGTATCAT GAAGGCCTAC ACCACTCGCG TGGGTGCCGG TCCTTTCCCA
ACTGAACTCG AGTGTGAAAT TGGTGACCAT CTGGGTACCA AGGGCCACGA GTTTGGTGCC
ACCACTGGCC GTAAGCGTCG TCCAGGTTGG CTCGATGCTG TTGCCATGAA GCGTGCTATC
CAGATCAACA GTCTGACAGG TATCTGTTTG ACCAAGTTGG ACGTGCTGGA CGGCCTGGAA
GAAGTGAAGA TCTGTGTGGG TTATCAGCAG CCAGATGGCA CTGTTACCAC TGTGACTCCT
CTTGCCGCTG AAGGTTATGA GCTGGTAACC CCAGTTTATG AAACCCTGCC AGGTTGGAGC
GAGAACACCT TCGGTGTGAC TTCCATGGAT CAGCTGCCAC AGGCGGCCGT TAATTACATC
AAACGTATCG AAGAGATTTT GGAGACGCCA ATCGACATCA TCTCTACCGG TCCGGATAGG
AACGAGACCT TTATCCGGGT CAGTCCGTTT AACTGA
 
Protein sequence
MGKNVVVLGT QWGDEGKGKI VDLLTEQAKY VVRYQGGHNA GHTLVIDGVK TVLHLIPSGI 
LRDNVKCIIG NGVVLAPDAL MKEISMLKER GVPVEDRLLI SEACPLILPF HCAVDIAREK
ARGNKAIGTT GRGIGPAYED KVSRRGLRVG DLFNAELFAE KLKEVMKYHN FMLTEYYGAE
AVDYQTTLDD ALAMADYLKS MCVDVTEMLD QARKAGENIL FEGAQGTLLD IDHGTYPFVT
SSNTTAGGVA TGSGFGPCHL DYVLGIMKAY TTRVGAGPFP TELECEIGDH LGTKGHEFGA
TTGRKRRPGW LDAVAMKRAI QINSLTGICL TKLDVLDGLE EVKICVGYQQ PDGTVTTVTP
LAAEGYELVT PVYETLPGWS ENTFGVTSMD QLPQAAVNYI KRIEEILETP IDIISTGPDR
NETFIRVSPF N