Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3066 |
Symbol | |
ID | 4605313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3643340 |
End bp | 3644062 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782482 |
Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
Protein accession | YP_928938 |
Protein GI | 119776198 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0466903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.239328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGGCA TTCATGCGGT CGAGTCTGTG CTAAAGCATG CCCCCGAGCG CGTGCTCGAG TTGTGGCTGA TGACCGGCCG TCAGGACGAA CGGGTGCTGC CACTCTTGGA AATAGCGCAA AACTGGGGCA TCAAGGCCCA GCAGGCAGCA CGCAAAACCC TTGACGAAAA AGCCGAAAGC ACACAGCATC AGGGCATTAT CATTCGGGTG CGTCCGGCTA AGGTGTTGAC TGAAAACGAT CTCGAAGCTT TGCTCGATGC CACCGAAACC CCGTTTTTAC TGATCCTCGA TGGGGTGACA GACCCTCACA ATCTGGGCGC GTGTTTGCGT AATGCCGATG CGGCTGGCGT GCATGGGGTG ATAGTGCCTA AGGACAACTC AGCCGGTTTG ACGCCAACCG TGAGTAAAGT GGCCTGCGGC GCGGCGGAAA CCGTGCCTCT GTTTCAAGTG ACCAACCTTG CCCGCACCAT GAAGCGCATT CAGGAGCGCG GCGTGTGGAT TGCCGGTACC GCCGGTGAAG CTGACTCGAC TCTGTATGAG GCCAATCTCA AAGGGCCGCT TGCCATTGCC ATGGGCGCGG AAGGCAAGGG CCTCAGACGC TTAAGCCGTG AAGGTTGCGA TACCCTGATT TCCATCCCTA TGGCAGGCAG TGTTTCCAGC CTCAACGTCT CTGTGGCGAC CGGAATCTGT TTGTTTGAGG CCGTGCGTCA GCGGTTGGGA TAA
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Protein sequence | MFGIHAVESV LKHAPERVLE LWLMTGRQDE RVLPLLEIAQ NWGIKAQQAA RKTLDEKAES TQHQGIIIRV RPAKVLTEND LEALLDATET PFLLILDGVT DPHNLGACLR NADAAGVHGV IVPKDNSAGL TPTVSKVACG AAETVPLFQV TNLARTMKRI QERGVWIAGT AGEADSTLYE ANLKGPLAIA MGAEGKGLRR LSREGCDTLI SIPMAGSVSS LNVSVATGIC LFEAVRQRLG
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