| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3036 |
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| Symbol | |
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| ID | 4605283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3611651 |
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| End bp | 3614893 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782452 |
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| Product | transporter, putative |
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| Protein accession | YP_928908 |
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| Protein GI | 119776168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0415629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGT TGATTTCACT TCAGCCCAAG TTTGGTGCCA TGTTACGTTT TTTGCTGATT
GCGTTCTTTT TTTTCCCACT TTTCTCCCTC GCCAACCCCT CTTTGCAGTT GGAAAAACGG
CTGGGCTTCT CCCAGGGAAC CAACACACCT CAGCCGAGTG TTTCTCAGCA AACACTGGAG
CTGACAGAAA CCGCCGAACT CCTTGCCCAA CAGGCCGCTG AATATCAACA GCAGCTGCTG
GGCTTTGTCG ATGAAAAAGC CCGTTTGCAA AAGGCGCTGG CGGCGACACA AAAAGACTTG
CCATTGGCCA GACGGCAGGA TTTGAATCAG CAGGCATCGG CAGCCTATTT ACAGCTGTCG
ACCTTAAAGG AAGAAGAAAC CCAACTCATA CAGCAGCACA GTACGCTGCT GCAACGTCAT
AATCAGTTGC CCACCGCGGT GGCAAATGCC AGACAAGCCC TTATCCAGCA TCAAAAGGCT
CCCCAAGCCC CATTGGACAG CCCCAACGGG GCTTTGCAAT TGGCCCAGCG ACGCTATTAC
GAGCAGAACC TGGCCACACT CGAGGCTGAA CAGGCATCCA GCCAGAAACG TATAGAACTG
GCGCAATTCA AATTGCAGTT GGTACGGGCA CAGTTGCGGC AACAGGAACT CTTCATCGAA
AAGCTGAACC GCGCCATTAG CAGCCAGCGT CAGGCCGTTA CAGACGCGAC GCTGGCCAAC
AACGTCTCCA CAGACACAGA GCCCCAGGAT GCCCTCTCCC AGCAGCTGCA AACCAACAAT
GCCCTGCTTG GGCAAAAACT GCAGACCCTG ACCCTGCAGA TAGACAACGT GGTCGACATG
CAGGAAGTGG CCGAAAAGCG CTATCAGGAA CAGTCACTGC AAGTCTCCAG CGTTCAGGAA
CAAATCTCCT GGGTGAAAAC CAATTCCGCC TTTGGCGAAC GCTTTTTACA GATGTTGCAA
AGCCTGCCAA AGCCCCCCAA TCCAGAACAT TTACAAAATC AAATCGCCGA TGCACGTCTG
GCCCGTTACC AGATGGAGCA GGAGCTGGCG CGTAATCAGG AACAACTGGA TCAAAAATCC
CTCTACAGCG AAGCACAGTA CAGCCTGCTC CAGGCCGAGC AAAAACTACT GAAGCAGATG
CTGCAGGGTT TTGACTTGCT GCTGAGCGAG TTGGCAAAAC TCAAGGTGAG CCACACTGAG
CTCAATGCCC AATATGTCAC CTTGAAAAAT ACCCTCAGTG AGCACCTGTT TTGGGTACCC
AACGCCGCTC CCATCGGCAA GCTCTGGCTG ACAGATTTGC ATCGCAGCCT GATCTGGCTT
GTTCAACAGG CACCATGGCA GCAATTGTCG ATGGCACTGG ATGAACAGAG TGATTACTGG
TCGTGGTGGC TGATTTTACT GGTGCTCTGC TGGGTGATTC AGGATGTGAT ACGCCCTCGA
TTTGATAAGG CCATGAATCA CTTTTTACAG CCCGTCGGCA ACGTGACCCA GGATGATTTC
AAGTACACCT TCGAAACCCT GCTGCTGACC CTGGGTTACG CCTTGCTTCG CCCTGCCCCC
ATTGTTCTGG CCGGCGGCTT TTTCATGCTT AGTCAGTACA ATCTGGTGCA GGCCGTGGGT
GCCGGTATCC TGGTGTCCGG TTGTGTCTAT CTGGTTTACC GCTTTATGTT TCTGCTGTCT
ATTGAGAAAG GCCTGCTGAT AGGCCATTTC CGTAGGCCCA GGGAGGTAAT CGAGCATGGT
AAGCAGCGCC TTAAGGCGGC GATGCTACTG GCTCTGCCCC TGGTGGCCGT AGTCAGTTTC
ACCGAAATTC TGGATGTCTC TCTGGTCAGA AACAGTCTCG GCCGGGGCGC CTTTATTTTG
CTGTGCCTGC AACTGCTGTG GTTCTATCGC GATATCCTCA AATACGCCAA AGGCTACCGT
CAAAGCCACG AGCCCCAGGG AAAGAACCGC CGTCTGCTGC AGCGCTTTTT ATGGTTGATG
TTGCTGCTGA CTCCCGCTAT TTGTACCTTG CTGGCGCTGC GCGGTTTTTA CTTCACTTCG
TTCCAGCTTA TGTTGCAGCT GCAGATATCC CTGTTGCTGG CACTGGGCTT TTTGCTGCTG
TATCAACTTA TCAAGCGTTG GATGCTGATT GAGAGGCGCC GAATCGCTTT TGACCGCGCC
AAGGCAAAAC GGGCTGAAAA GCTGGCACAG CGGGAGCGGG GTGAAACTGT ATCCGCAGAC
AGCCAGGATG TGTATGAAGA GCCAAAAGTA GATCTCGAAA CCATTTCCAG TCAGTCACTT
GGACTGGTTC GTTCCTTGTT GATTCTAGCG TTTCTGGCCA GCTTGATTGG CCTGTGGACG
CAAACCCACT CGGCGCTGTT TTCCTTCCTC GACGGCATCA ACCTCTGGAC CAGTACCGCC
ATTATTGACG GTGGCGAACA GCTGGTGCCC ATTACCCTGA AGTCGGTGCT GTTTGGGGTG
CTTATCATGG TGTTCTCGCT GATGATAGCC ACCAATTTGC CCGGCCTGCT GGAGCTGGTT
ATTCTGCAGC GACTGGACTT AACCCCGGGC ACAGGTTTTG CCATTACCAC GGTCAGCCGC
TACCTGGTGG TGATGGTGGG CACCCTCGTG GGCTTCTCCA CGCTGGGGAT GGAGTGGTCC
AAGTTACAGT GGCTGATTGC CGCTCTGTCG GTGGGCTTGG GTTTTGGTTT GCAGGAGATT
TTTGCCAACT TTATTTCGGG TCTTATCATA CTGTTTGAAA AACCAGTGCG TATCGGCGAT
ACGGTGACCA TTCGCGATCT CACCGGCACC GTCAGTAAAA TTCAGATTCG AGCCACCACC
ATCATAGATT GGGACAGAAA AGAAATTATC GTCCCCAATA AGGCCTTTAT CACCGAGCAG
CTGATCAACT GGTCGCTGTC CGACCCGATA ACCCGGGTGA TCATCAAGGT GGGCGTGGCC
AGAGATTCCG ATCCCGCCAA GGTCGAAGCC AGCCTTTATC AGGCCATCAA AGAATGCCAG
CATGCACTGC ACACTCCTGA GCCCGAAGTC TGGTTCGCTG GCTTTGGTCA GCACACCCAG
GATTATGAAG TAAGAGCTTA TGCCAAGGAT ATGGGCAGCC GCTGGCCGCT GCGACACGAT
CTGCACAAAC GTATCAGTAC CAAGCTGAAA GAAAACAATC TGGAGCTGGC CTATCCCCAG
ATGGAAATCA CCATCAATCA AGGGGGTGTG CCGAGCCGTG ACGCCCAAAT CCAACTGCGC
TGA
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| Protein sequence | MAELISLQPK FGAMLRFLLI AFFFFPLFSL ANPSLQLEKR LGFSQGTNTP QPSVSQQTLE
LTETAELLAQ QAAEYQQQLL GFVDEKARLQ KALAATQKDL PLARRQDLNQ QASAAYLQLS
TLKEEETQLI QQHSTLLQRH NQLPTAVANA RQALIQHQKA PQAPLDSPNG ALQLAQRRYY
EQNLATLEAE QASSQKRIEL AQFKLQLVRA QLRQQELFIE KLNRAISSQR QAVTDATLAN
NVSTDTEPQD ALSQQLQTNN ALLGQKLQTL TLQIDNVVDM QEVAEKRYQE QSLQVSSVQE
QISWVKTNSA FGERFLQMLQ SLPKPPNPEH LQNQIADARL ARYQMEQELA RNQEQLDQKS
LYSEAQYSLL QAEQKLLKQM LQGFDLLLSE LAKLKVSHTE LNAQYVTLKN TLSEHLFWVP
NAAPIGKLWL TDLHRSLIWL VQQAPWQQLS MALDEQSDYW SWWLILLVLC WVIQDVIRPR
FDKAMNHFLQ PVGNVTQDDF KYTFETLLLT LGYALLRPAP IVLAGGFFML SQYNLVQAVG
AGILVSGCVY LVYRFMFLLS IEKGLLIGHF RRPREVIEHG KQRLKAAMLL ALPLVAVVSF
TEILDVSLVR NSLGRGAFIL LCLQLLWFYR DILKYAKGYR QSHEPQGKNR RLLQRFLWLM
LLLTPAICTL LALRGFYFTS FQLMLQLQIS LLLALGFLLL YQLIKRWMLI ERRRIAFDRA
KAKRAEKLAQ RERGETVSAD SQDVYEEPKV DLETISSQSL GLVRSLLILA FLASLIGLWT
QTHSALFSFL DGINLWTSTA IIDGGEQLVP ITLKSVLFGV LIMVFSLMIA TNLPGLLELV
ILQRLDLTPG TGFAITTVSR YLVVMVGTLV GFSTLGMEWS KLQWLIAALS VGLGFGLQEI
FANFISGLII LFEKPVRIGD TVTIRDLTGT VSKIQIRATT IIDWDRKEII VPNKAFITEQ
LINWSLSDPI TRVIIKVGVA RDSDPAKVEA SLYQAIKECQ HALHTPEPEV WFAGFGQHTQ
DYEVRAYAKD MGSRWPLRHD LHKRISTKLK ENNLELAYPQ MEITINQGGV PSRDAQIQLR
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