| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3034 |
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| Symbol | psd |
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| ID | 4605281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3609878 |
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| End bp | 3610741 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782450 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_928906 |
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| Protein GI | 119776166 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.749088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAAAG TGAAAATCGC CCTTCAATAC CTGATGCCCA AACATTTGGT ATCACGCATC
GTGGGTAAAT TTGCCGCTGC CGAGGCGGGT TTTGTCACCA CCGCCTTTAT CAAATGGTTT
ATCAAGCAGT ACGGCATCAA CATGAGTGAA GCCCTGCATT CCAATCCCGA GGCCTACAAA
ACCTTCAACG ACTTCTTTAC CCGTGAACTG AAACCCGGTC TGCGCCCTAT AGACCAGGCT
GAAGACATCA TGGTACATCC CGTTGATGGC GCGGTAAGCC AGCTGGGCCC CATCGAGGAT
GGCCGCATTT TCCAGGCCAA GGGGCACCAC TACTCGGCGC TGGCGCTTTT AGGTGGTCAG
GCCGATGATG CAGCCCGTTT TGAAGAAGGT GATTTTGCCA CCATTTACCT GGCGCCGAAG
GATTACCATC GTATCCACAT GCCCATCAAA GGCACACTGT CAAAAATGAC CTATGTGCCC
GGAGAGCTCT TTTCGGTTAA CCCACTGACA GCCCGCAATG TGCCTGGTCT GTTTGCTCGC
AACGAGCGTG TTGTGGCGAT TTTCGAGACC GACAAAGGCC CGCTGGCCAT GGTACTTGTG
GGTGCTACCA TAGTCGCCAG CATTGAAACC GTCTGGGCAG GCACTGTCAC GCCGCCAACC
GGTAAAAAGG TCTTTACCTG GGACTACCCC ACCGAAGGCC CAGAAGCCCT TACACTGGAG
AAAGGCGCCG AAATGGGCCG CTTCAAGCTT GGCAGTACAG TGGTGATGCT GTTTGCCAAA
GATGCCATCG ATGACTTCGC TGACGGCGTA AAGCCTGAAG CGGTTACCCG CATGGGTCAG
CCTTTCGCCA AACTGGAGGA CTGA
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| Protein sequence | MDKVKIALQY LMPKHLVSRI VGKFAAAEAG FVTTAFIKWF IKQYGINMSE ALHSNPEAYK
TFNDFFTREL KPGLRPIDQA EDIMVHPVDG AVSQLGPIED GRIFQAKGHH YSALALLGGQ
ADDAARFEEG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARNVPGLFAR
NERVVAIFET DKGPLAMVLV GATIVASIET VWAGTVTPPT GKKVFTWDYP TEGPEALTLE
KGAEMGRFKL GSTVVMLFAK DAIDDFADGV KPEAVTRMGQ PFAKLED
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