| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2996 |
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| Symbol | |
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| ID | 4605243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3568613 |
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| End bp | 3570520 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782407 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_928868 |
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| Protein GI | 119776128 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC TGTCCCAGGC CCAGCTTATC CGTGGCAGCA AAGTACTGCT GGATGAGGCC
AATCTCACTA TTTACCCCGG TCACAAGGTC GGCCTTGTTG GCGCCAATGG CACCGGCAAA
TCCTCATTGC TGGCATTGAT CATGGGCAAA CTCAGCCTGG ACAAGGGCGA TATTCAGGTA
CCCCGCGAGT GGCGCATTGC CTCTGTGGCT CAGGAAACCC CGGCACTGGA AGTCTCGGCA
CTGGAATATG TGCTCGATGG CGACATGGAG TTTCGTGAAC TCGAAGCGGC TTTAAGAAAA
GCAGAGACCG ATAACGATGG CCATGCCATT GCAGACCTGC ACGGTAAGCT TGATGCCATC
GGCGGCTACA GCATACGTGC CCGCGCCGGC GCCCTGCTGG CGGGTTTGGG CTTCAGCGAA
GAAAAGCAGT CGGTCAGCGT GAAGAGCTTT TCCGGTGGCT GGCGTATGCG CCTTAACCTG
GCTCAGGCGC TGCTTTGCCG ATCAGAATTG TTGTTGCTTG ACGAACCGAC CAACCACCTT
GATCTGGACA CCATGTTCTG GCTCGAGGAT TGGATCAAGA GCTACCCGGG CACCCTAGTG
CTCATCAGCC ACGATCGCGA CTTTATCGAC GCCATTGTGG ATGAAATCGT CCATGTGGAA
AACCAGAAGC TTAACTTCTA CAAGGGCAAC TACAGCACGT TTGAGCGCAC CCGCGCCGAG
CGTATGGCGC AGCAGCAGGT GGCCTTTGAG CGCCAACAGC GGGAACGCGC CCACATGCAA
TCCTTCGTCG ACCGTTTCCG CTACAAGGCC AGCAAGGCCA AGCAGGCACA AAGCCGTTTG
AAGGCATTGG AAAAGATGAC TGAGCTCTTG CCCGCCAAGG CCGACAGCCA GTTCTATATG
GAGTTTCGCG AACCCGCCAG TCTGCCAAAC CCCTTGGTGG CCATGGAAAA CGTGTCTGTG
GGTTATGGTG AAACGCCCAT CCTCGGTAAG GTGCATTTAA ATCTGGTGCC CGGTGCCCGC
ATTGGTCTTT TGGGCCGCAA CGGCGCCGGT AAATCGACCC TGATTAAATT GCTGGCGAGC
GAGCTCAAAC CGCTCACCGG CAAGTACGAG CCCAACCCAG GCCTCACCAT TGGCTACTTT
GCCCAGCATC AGCTGGAGTA TTTGCACATG GATGACAGCC CGCTGATGCA CCTGCAGCGA
CTGGCGCCCA GCCACCGAGA ACAGGAACTG CGGGACTTCC TCGGTGGTTT TGGCTTTAAT
GGCGACATGG CACTCTCGCC GGTCGCGCCC TTCTCCGGCG GCGAAAAGGC CCGTCTGGTA
CTGGCGCTGC TGGTGTGGCA AAGCCCCAAC CTGCTGCTGC TGGACGAACC CACCAACCAC
CTGGATCTGG AAATGCGCCA CGCTCTGACG CTGGCACTGC AAACCTTTGA AGGTGCCATG
GTGATAGTGT CCCACGACAG GCACCTGCTC AGGCTCACCT GTAATGACTA CTATCTGGTA
GATGCCGGTC AGGTCAGCAG TTTCGAAGGC GACCTTGAGG ACTACCATCA GTGGCTGCTG
GATGCCGCAA AGGCAGCGGC CGCCAAGGCC AGCGATAACG ATGCAGAGCG CCCGGCGCAG
GACAAGAAGC AGCAAAAGCG ACTGGAAGCT GAACTGCGCC AAAAGCTCTC GCCCCTGAGA
AAGCAGCAAA CCAAACTCGA AGATGAGCAG CATAAAATCG CCAGCCGTCT CGCACTGATT
GAAGAACGTC TGGCCGATAC CAGTTTGTAT GAGGCGCAAA ACAAGGCGGA GCTGACTAAA
ATACTGGCCG AGCGAACCAC TCTTGGTCAG CAGCAGGAAG AAAGCGAAAT GGCGTGGTTA
GAGCTTCAGG AGCAAATTGA CGTTATCGAA CAGGCCGCCC AGCTCTGA
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| Protein sequence | MITLSQAQLI RGSKVLLDEA NLTIYPGHKV GLVGANGTGK SSLLALIMGK LSLDKGDIQV
PREWRIASVA QETPALEVSA LEYVLDGDME FRELEAALRK AETDNDGHAI ADLHGKLDAI
GGYSIRARAG ALLAGLGFSE EKQSVSVKSF SGGWRMRLNL AQALLCRSEL LLLDEPTNHL
DLDTMFWLED WIKSYPGTLV LISHDRDFID AIVDEIVHVE NQKLNFYKGN YSTFERTRAE
RMAQQQVAFE RQQRERAHMQ SFVDRFRYKA SKAKQAQSRL KALEKMTELL PAKADSQFYM
EFREPASLPN PLVAMENVSV GYGETPILGK VHLNLVPGAR IGLLGRNGAG KSTLIKLLAS
ELKPLTGKYE PNPGLTIGYF AQHQLEYLHM DDSPLMHLQR LAPSHREQEL RDFLGGFGFN
GDMALSPVAP FSGGEKARLV LALLVWQSPN LLLLDEPTNH LDLEMRHALT LALQTFEGAM
VIVSHDRHLL RLTCNDYYLV DAGQVSSFEG DLEDYHQWLL DAAKAAAAKA SDNDAERPAQ
DKKQQKRLEA ELRQKLSPLR KQQTKLEDEQ HKIASRLALI EERLADTSLY EAQNKAELTK
ILAERTTLGQ QQEESEMAWL ELQEQIDVIE QAAQL
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