| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2980 |
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| Symbol | |
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| ID | 4605227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3549370 |
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| End bp | 3550584 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782391 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_928852 |
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| Protein GI | 119776112 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC CCACAAAGAA ACCCAGTGCC CAGGACGCTT ACTACGCTCC CGGACACACG
ATGAAAGACT TTTTCCGCTC GCTGTTTATC GGCCATGGCG CCAGCACCCA GGATAGGGTG
CACGTGCGTG ATGCCATTGA AGTGAAGCGC ACCATGACCC TGGTGGGCCT GTGTCTGCTG
CCTGCCATCC TGTTTGGCAT TTATAACACC GGGCTGCAGG CGCAAATCGC CATACTGGCG
GGCAGCGCGC CACTGGATAA CTGGCATCAG GGCTTTTACA GCGCCATCTT CGGCGGCCTG
ACTGAAAGCA CCGGCATCTT TGGTCTGATG GCTTACGGCC TGATTTACTA CCTGCCGATT
TATCTCGCGG CGCTCGTTAC CACCATGTTC TGGGAAATGG TGTTTGCCAG GGCAAGACGC
CAGGAAATGC AGGAAGGCTT CTTTGTTACC GCGCTGCTGT TCAGCCTGTG TTTGCCCGCC
AATATCAGCC TGTGGCTGGT GGTGATGGGC ATCAGCTTTG GCGTTGTGGT GGCCAAAGAG
CTCTTCGGTG GCATGGGTTA CAACTTCCTG AATCCCGCGC TGGCGGGCCT GGCCTTTATC
TATTTTGCCT ACCCAAGCGA AGTGACTACT TCGGCGCAGC TGGTGGCGGT GGATGGTTAC
AGCTCGGCCA CCACCCTGGC GCAGGTTGCG GCCAACAAGA TGAAGTTTGC CGAGTACCCC
TGGTACCACG CCTTTAACGA CGCCGCCTGG TGGGATGCCT TCTTAGGCTT CGAAGTGGGT
GCCATTGGTG AAACCTCGGC GCTGGCGATT TTTGCCGGTG GTCTCTTGCT TATCCTTACC
CGTCTCGCCG ACTGGCGCAT CGTGGTGGGC GTACTTGTGG GTGCCATTGC CACTTCCCTG
CTGTTCAATG TGTTTGGCGA CGGTAAAAAC GCCATGGCGG CCATGCCCTG GACCTGGCAT
CTGGTGACCG GCGGCTTTGC GCTGGGGATG ATGTTTATGG CAACCGACCC TGTGACCACC
GCCTACACCC GTCCCGGCAA GCTGATGTTC GGTATCCTGG TGGGCGCCAT GACCATTCTT
ATCCGCGTTG CCAACGTCAA GCAGCCCGAG GGCATCATGC TGGCGATTCT GTTCGCCAAC
CTGTGGGCGC CTGTGCTGGA TTCGCTGGTG GCAAGATTCA ATATCAAACG GAGGCTGAAG
CGCAATGGCC TTTAA
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| Protein sequence | MSKPTKKPSA QDAYYAPGHT MKDFFRSLFI GHGASTQDRV HVRDAIEVKR TMTLVGLCLL
PAILFGIYNT GLQAQIAILA GSAPLDNWHQ GFYSAIFGGL TESTGIFGLM AYGLIYYLPI
YLAALVTTMF WEMVFARARR QEMQEGFFVT ALLFSLCLPA NISLWLVVMG ISFGVVVAKE
LFGGMGYNFL NPALAGLAFI YFAYPSEVTT SAQLVAVDGY SSATTLAQVA ANKMKFAEYP
WYHAFNDAAW WDAFLGFEVG AIGETSALAI FAGGLLLILT RLADWRIVVG VLVGAIATSL
LFNVFGDGKN AMAAMPWTWH LVTGGFALGM MFMATDPVTT AYTRPGKLMF GILVGAMTIL
IRVANVKQPE GIMLAILFAN LWAPVLDSLV ARFNIKRRLK RNGL
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