| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2971 |
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| Symbol | |
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| ID | 4605218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3537747 |
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| End bp | 3540086 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782382 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_928843 |
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| Protein GI | 119776103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAG ATAAACGGAA TTCAGGCAAA AGGGCGCCCG CCAAGGGCGC ATCGGCAAAG
TCCAGAACGT CAGCCAAAGC CCGTAATAAG CCCGGGATCC TGCGGCGCAT ATGGTCATTC
CTGTGGAAGC TGACCCTGGT GGTGTTGGTG CTGTGCGCCG CCTATGGCAT TTACCTCGAC
CAGCAAATTG CCCGCAAATT TGAAGGCCAG AAGTGGCACC TGCCGGCGCA GATTTACAGT
CGTTCCATGG CGCTCTATCC GGGGGCGGCC GTGAGCCATC ATCAACTGCT GGCCGAACTC
CAACTGTTGG GATACCGCAA GGTAGCCAAT CCCCGTCAGG TCGGTGAGTT TTCTGCCTCC
GCTACCCGCA TCGATTTGTG GCGCCGTCCC TTCCTGCATC CGCTGGGCAG CCAGGATGCG
GCACGTGTGA TGATTGCATT TGATTCGCAA GGGGTTTCTA CGGTGTCTCG CCACGGCGAC
AAGCGTGAGC TGGCGGTGTT TCACCTCGAA CCCATGCTGC TGGACCGACT GATTGCCGAC
GATGGCGAAG ACAGGCTGTT TGTTCCGCGC AGGGAAGTGC CCGATACCAT GGTTGAAGCG
CTCCTCCTGG TGGAAGACCG CAGCTTTTAC GAGCACCACG GGGTGAATCC CTTTGCCATT
TTGCGCGCGG CTTTTGTCAA TATCAGCGCC GGGCGCACAG TGCAGGGTGG CTCTACCCTG
ACCCAGCAGC TGGCGAAAAA CTTTTTCCTC TCCAGCGAGC GCTCCCTTAT CCGTAAGGTG
CGCGAAGCCT TGATGGCCAT CATCATCGAC TTCCGCTACA GCAAGGATGA GATCCTCGAG
GCCTACCTCA ACGAAGTTTA CATGGGGCAG GACAAGTCCC GTGGTGTGCA CGGTATGGGG
CTGGCATCGC AGTTTTACTT TGGTCGTCCG CTCACCGAAC TCACCACTGC CCAGCAGGCT
TTTTTGATTG CGGTGATCAA GGGGCCTTCC TACTACAATC CCTGGCGTTA TCCGGCGCGG
GCACAGGAGC GACGTGATCT GGTGCTCAGG CTCTTGATGG AGTCGGGCAA AATCAGTGTC
AACGACTTCC AGATTGCCGC CGAATCGCCC CTGGGTTTAA GACCCGAAGG ACGCCCTGTG
CATCAGCGTA TGCCGGCCTT TTACACCCAG GTGAAAAAAG AGCTGGCGCT GCGCTGGGGG
GACAGCCTGC TCAATGAGTC GGGCATCAAG GTGTACACCA CTCTCGACCC CATCGCCCAG
GAAGCCGCCG AGAAGGCCGT GAAAGAGGTG ATGGGCCGTA TCGGCAAAGA CACCAAGGAA
CTGCAGGCTG CCATGGTGGT TACCGACAAG TTTGGTGGCG GCATTGCGGC CATGGTGGGG
GACAGAAACC CCAGCTTTGA AGGTTACAAC CGGGTCAGTG AGATGCGTCG CCCCATAGGT
TCGCTGGTCA AGCCTTTCGT GTATATGACG GCCCTCGAAG ACAGCAACTA CAACCTGATG
ACGTCGTTGA AAGACGAGCC CCTGACCGTG ACCAACAAGC ATGGCCAGAG CTGGTCACCC
ATGAACTACG ACAAGACGTT CAGTGGTCAG GTGCCTTTGA TGCGCGCCAT GTACAAATCA
CTCAACGTCC CCACTGTGAA TCTGGGGCTG GCCGTGGGCG TGGATGCGGT GATTAACACC
CTCGACGATG CCGGCTGGCG CGGTGAGGCC ATTAATCCCT ATCCGTCGAT GCTGCTGGGC
GCCGTGGATG GCTCGCCACT GATGGTGGCA CAGATTTACC AGACACTCGC AGACAATGGC
CGTTATCGCC AGCTATCCAC CGTCACCGAT GTGTTGGATA TGAATAACGA AGCCATTCTG
GCCAGTCGTT TGCCCTCTGA GCAATCGCTT GAGCCAGCGG CGGCCTATCT GTCCCAGTAC
ATCATGACCC GTGTCGTGTC GGAAGGTACA GGTGCGCGCC TTGGCCGCGC CTTCCCCAAC
GTGACCCTGG CGGGCAAGAC CGGCACCAGT AACGATAGCC GTGACTCCTG GTTTGCCGGT
TTTGATGAGC GGAACGTGGC TGCTGTATGG GTGGGCCGCG ATGATAACGG CAAGACCAAA
CTGGTGGGTG CCAGCGGCGC CATGGCGATT TATCAGGCCT TCCTGGAGGC ACGCCCGCCG
GTGGCGCTGA GGATGACGCC ACCTGACGAT GTGGTGCAGG GCTATTTTGA TTTGAATGGC
AACGCGCTGG AAAAAGGCTG CCCGGGTGCG GTGGCACTGC CTGCAAAAGC AGGCAGCTGG
AGGCCGGCAC AAAACTGTGG CAAGCCGCTA TCCTGGTGGC AAAAAATTAT CGGTGGTTAA
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| Protein sequence | MTSDKRNSGK RAPAKGASAK SRTSAKARNK PGILRRIWSF LWKLTLVVLV LCAAYGIYLD
QQIARKFEGQ KWHLPAQIYS RSMALYPGAA VSHHQLLAEL QLLGYRKVAN PRQVGEFSAS
ATRIDLWRRP FLHPLGSQDA ARVMIAFDSQ GVSTVSRHGD KRELAVFHLE PMLLDRLIAD
DGEDRLFVPR REVPDTMVEA LLLVEDRSFY EHHGVNPFAI LRAAFVNISA GRTVQGGSTL
TQQLAKNFFL SSERSLIRKV REALMAIIID FRYSKDEILE AYLNEVYMGQ DKSRGVHGMG
LASQFYFGRP LTELTTAQQA FLIAVIKGPS YYNPWRYPAR AQERRDLVLR LLMESGKISV
NDFQIAAESP LGLRPEGRPV HQRMPAFYTQ VKKELALRWG DSLLNESGIK VYTTLDPIAQ
EAAEKAVKEV MGRIGKDTKE LQAAMVVTDK FGGGIAAMVG DRNPSFEGYN RVSEMRRPIG
SLVKPFVYMT ALEDSNYNLM TSLKDEPLTV TNKHGQSWSP MNYDKTFSGQ VPLMRAMYKS
LNVPTVNLGL AVGVDAVINT LDDAGWRGEA INPYPSMLLG AVDGSPLMVA QIYQTLADNG
RYRQLSTVTD VLDMNNEAIL ASRLPSEQSL EPAAAYLSQY IMTRVVSEGT GARLGRAFPN
VTLAGKTGTS NDSRDSWFAG FDERNVAAVW VGRDDNGKTK LVGASGAMAI YQAFLEARPP
VALRMTPPDD VVQGYFDLNG NALEKGCPGA VALPAKAGSW RPAQNCGKPL SWWQKIIGG
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