Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2898 |
Symbol | |
ID | 4605145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3445442 |
End bp | 3446728 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782309 |
Product | 4-hydroxybutyrate coenzyme A transferase |
Protein accession | YP_928770 |
Protein GI | 119776030 |
COG category | [C] Energy production and conversion |
COG ID | [COG0427] Acetyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.669885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.828985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACCCA AGTACTGTGC CACCGCTCTG GAGGCGGTGT CGTTAATCGA TAATGACGAA TTCATCTGGA CCCACTCCAT GGGGGCGACG CCTAGACTCT TGCTGGAGGC CCTGGCTGAA CATGCGCTAA ACCGCACTAA TCTCACGCTA TTACAATTAC ATACTGAGCA TGCCGAATGC CTCAGTGGCC CAGAGCTTGA GGGGCATTTG CGCCATCGCT GCTATTTTGG TGGCAAGCCG ACCCGTGAAC TGCTCGCCAG TGCCCGTGCC GACTATGTGC CGGTGTTTTT ATCCGAAGTA CCAAAGCTTT TTCGCCGCCG TGAGCAGCGT ATCGACACTG CAATAGTGCA GGTGTCACCG CCGGATAAGC ATGGCATGTG TTCTCTTGGT ATTTCAGTGG AGGCGACCCG CGCCGCCTGT GAGGTGGCTG GTAAGATAAT TGCCCATATC AACCCCCGTA TGCCCCGTAC CCACGGCGAC AGTTTTCTTC CGCTGACCCG TTTTGATGCC GTGTTTGAAG CGCCCATGGA GCTACCGGAA CATGCTCTGG CGACGACAGA TGCGGTAAGC CAGGCCATTG GCCGTAATGT GGCGGCGCTG GTACGCGACG GTGACTGCTT ACAGATGGGG ATTGGTGGTA TTCCCGATGC CGTGCTGGGT TGTCTTGGCA ATCACCAGCA CCTGGGGGTG CATACGGAGC TGTTTTCTGA CGGCATCTTG AGTTTGGTGG AGCGCGGCGT GGTGGATAAC AGCCGCAAAC GCTTCGCCAC CGGCAAGCTG GTAACGGGTT TTGCTTTGGG TAGCCGCAGG CTTTACGACT TTGTGGACGA CAATCCCCAG GTGGCATTTT TGGATATTGA GCAGGTCAAC GACACCGCCA TCATCCGCCG TAACCCGCAG GTGATGGCCA TTAACTCGGC ACTGCAGGTG GATGTGACCG GTCAGGTGTG CGCCGACTCC ATAGGGACCC GTATTTATTC CGGTGTGGGC GGCCAAATGG ACTTTATCCG CGGCGCCGGA CTCTCTGAAG GGGGCCGCTC TGTGATTGCC ATGCCGAGTA CGGCAGCCGG AGGCAAGGTG TCCCGCATCA GTACAGTGTT GTCTCCCGGT GCCGGGGTGG TGACCACCCG CGCCCATGTG CACTACATAG TGACCGAATT CGGTGTGGCC TACATGCGCG GTAAATCCAT TCGTGAGCGG GCCCGTTCTT TGATTGATAT TGCCCACCCG GATTTTCGTG AAGCCCTGGC CCGTGAAACC CATGAAATGT GGGGATTGTT GCTGTGA
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Protein sequence | MVPKYCATAL EAVSLIDNDE FIWTHSMGAT PRLLLEALAE HALNRTNLTL LQLHTEHAEC LSGPELEGHL RHRCYFGGKP TRELLASARA DYVPVFLSEV PKLFRRREQR IDTAIVQVSP PDKHGMCSLG ISVEATRAAC EVAGKIIAHI NPRMPRTHGD SFLPLTRFDA VFEAPMELPE HALATTDAVS QAIGRNVAAL VRDGDCLQMG IGGIPDAVLG CLGNHQHLGV HTELFSDGIL SLVERGVVDN SRKRFATGKL VTGFALGSRR LYDFVDDNPQ VAFLDIEQVN DTAIIRRNPQ VMAINSALQV DVTGQVCADS IGTRIYSGVG GQMDFIRGAG LSEGGRSVIA MPSTAAGGKV SRISTVLSPG AGVVTTRAHV HYIVTEFGVA YMRGKSIRER ARSLIDIAHP DFREALARET HEMWGLLL
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