| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2856 |
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| Symbol | |
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| ID | 4605103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3394977 |
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| End bp | 3395561 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782267 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_928728 |
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| Protein GI | 119775988 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.661308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGATTT TACAAAAGGG CACAGACAAG CGTGGCCAGA TTTTGTCGGC GGCGCTGCAT
CTTTTCAATG GTCAGGGATT TCACGGCACC TCCACCGCCA GTATTGCCAA GGCGGCAGGG
GTAGCCACAG GTACCCTGTT TCATCACTTT CCCAGCAAAG AAGCCCTGCT GGAGACCCTG
TTTTTAACGG TAAAGCAGGA GTTTGCCGAC AGCCTTGCGG CCATGGCAAT TTTGGAAGGC
TCTCTCGAAG ACAGGGCCAG GCAACTTTGG TTTGGCGCCA TCGACTGGGC GCTTGAAAAC
CCTGATAAAC AGCAGTTTTT TCAGCAATTT TCCATGTCGG TGGAAATCCC TTTATCGCTT
CGTGAGCAAG CCATGCAGGG TATCCTCGGC TTTATCGGCG TGATGATAGC CGAGGGGCAG
CAGTCAGGAG TGCTTTCGCG GTTACCGCTG CCACTGATGC TGGAAAATTG CCATGGCCAG
TATCTGGCCG CGACCCGCTT TTTTTTGGAT CATCCCGAAC TGGGTAATGA CGCGGAACAC
AAAGAAGCGA GTTTTCGCCT CTTCTGGCAC GCTATGGCGC TGTAG
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| Protein sequence | MAILQKGTDK RGQILSAALH LFNGQGFHGT STASIAKAAG VATGTLFHHF PSKEALLETL
FLTVKQEFAD SLAAMAILEG SLEDRARQLW FGAIDWALEN PDKQQFFQQF SMSVEIPLSL
REQAMQGILG FIGVMIAEGQ QSGVLSRLPL PLMLENCHGQ YLAATRFFLD HPELGNDAEH
KEASFRLFWH AMAL
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