Gene Sama_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2855 
Symbol 
ID4605102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3393525 
End bp3394964 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content56% 
IMG OID639782266 
Productconiferyl aldehyde dehydrogenase 
Protein accessionYP_928727 
Protein GI119775987 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0841165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAG CTACCCAGAT GCAGCCAACC CCATCCGGCG AAGTAGCCGC CATGCAGCAA 
ACCTTCGAAC GCCAACGACA AGAGTTTGCC AAGCACAGCT ATCCCAGCCT GAGTGAACGG
AAAAATGCAC TGAGCCTGTT GAAACTGACG TTGCTGGAAC AGCAAGATGC GCTGATAAAC
GCCCTGAGTC GCGACTATGG CCATCGCAGT GCTGATGACA GCCGCATTTC CGATATCATG
CCCGTGGTTA ACCACATCAA TTACACCCTG TCCAACCTCA AGCGATGGGC CAAGCCCAGC
CGCCGCCATG CGGGTATTCT TCTGGCTCCG GCCAGTGTCA ACGTGACCTA TCAGCCCAAG
GGTGTTGTGG GCATCATAGT GCCCTGGAAC TTCCCGGTGA TGTTAAGCCT GGGGCCGCTG
GTAACCGCCA TTGCAGCCGG TAACAGCGCC ATGTTGAAAA TGTCAGAATT TACCCCCGAG
ACCAATAAGG TGATCAAATC CTTATTGGCA AAAACCTTTG CCGAAAAGAA GGTGGCCGTT
ATTGAAGGGG AAGCCGATGT GGCCGCCGCC TTCTCTAGTC TGCCCTTCGA TCACCTCTTG
TTTACCGGTT CCACTGCCGT TGGCAAACAC GTGATGCGGG CCGCCAGCGC CAATCTCACC
CCTGTGACCC TGGAGTTGGG CGGCAAGTCC CCCGTGATAG TGGCGCCTGA CATGGATATG
GATACCGCGG TTGAGCGGAT GATTTATGGC AAATGCCTGA ACGCAGGACA AATCTGTGTC
GCCCCTGACT ATGTGTTGGT GCCACGGGGC AAAGAGGATG CCTTTATCAA GGCCTATCAG
GACAAGTTCG CCGCCCTCTA TGGCAAGGTG GAAACCAATA AGGACTATGG CGCCATCATC
AACGAACGCC AGTGGCAACG ATTAATGCAG GTGCTGGACG ACGCCAAAGC GCAAGGCGCC
AACGTGCACA GCGCCAGTGG TGAGCCGCCC CTTGGCACGC TGCGTAAACT GCCCACCCAA
TTGCTGACCC AGGTGACGGA TGAGATGCTG GTGATGCAGG ACGAAATCTT TGGTCCACTG
CTGCCGGTGG TGCCCTACGA CAGCCTCGAC GAGGCCCTGA GTTACATCAA TGCCCGCCCA
AGGCCGCTGG CGCTGTATCT GATGAGTTTC GATACGGCCA CCCAGGACAA GGTGCTCAGC
AGCACCCACT CGGGGGGCGT TTGCATCAAC GAAACCGTGT TTCATGTGGC GGCCGACGAT
GCGCCGTTTG GCGGGATAGG CCCCTCGGGA ATGGGCCACT ATCACGGTGA AGAAGGTTTC
CGCACCTTCA GCCACGCCAA AACGGTACTC AAACGTGGCC GCCTCAATAC CGGCAAGCTG
GTGCATCCGC CCTATGGCAA TGCCATTCAA ACACTGTTGA TGAAAGTGTT TTTGCGTTAA
 
Protein sequence
MNAATQMQPT PSGEVAAMQQ TFERQRQEFA KHSYPSLSER KNALSLLKLT LLEQQDALIN 
ALSRDYGHRS ADDSRISDIM PVVNHINYTL SNLKRWAKPS RRHAGILLAP ASVNVTYQPK
GVVGIIVPWN FPVMLSLGPL VTAIAAGNSA MLKMSEFTPE TNKVIKSLLA KTFAEKKVAV
IEGEADVAAA FSSLPFDHLL FTGSTAVGKH VMRAASANLT PVTLELGGKS PVIVAPDMDM
DTAVERMIYG KCLNAGQICV APDYVLVPRG KEDAFIKAYQ DKFAALYGKV ETNKDYGAII
NERQWQRLMQ VLDDAKAQGA NVHSASGEPP LGTLRKLPTQ LLTQVTDEML VMQDEIFGPL
LPVVPYDSLD EALSYINARP RPLALYLMSF DTATQDKVLS STHSGGVCIN ETVFHVAADD
APFGGIGPSG MGHYHGEEGF RTFSHAKTVL KRGRLNTGKL VHPPYGNAIQ TLLMKVFLR