Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2853 |
Symbol | |
ID | 4605100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3392500 |
End bp | 3392931 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782264 |
Product | hypothetical protein |
Protein accession | YP_928725 |
Protein GI | 119775985 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.036432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAACA AAACAATACT GTGGCCCACT GACTTTACTG AAACGGCCTC CCATGCGCTC AGGTATGCGG TGGAAATGGC CAACCTGTAC AAGGTAGGGC TGAAAATTCT GCATGTGGTC CCAAGACCCA TGGGGGATGA AAATTTCATG ATATTGGCGA TTACTCCGGA AGAACTCGCC AAGAGCATGG AGGACGCGGC CGCCGAGAAG ATGACATCCT TGCTCGCCAA GCTCCACACG GATTTGCCGG TTGAAACCCA AATCCGTATG GGGGAGGCAG CGGATGAAAT CATCGCCGAA GCCAACAGCG GTGAGGTTGG CATGGTGGTT ATTGCCAGCC ATGGGTACTC GGGTATTAAG CATTTTTTGC ACACCAATGT GGCTGAGGCT GTCGCCAATG GCGCCCAGTG TCCGGTACTG GTGGTGAAAT AG
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Protein sequence | MVNKTILWPT DFTETASHAL RYAVEMANLY KVGLKILHVV PRPMGDENFM ILAITPEELA KSMEDAAAEK MTSLLAKLHT DLPVETQIRM GEAADEIIAE ANSGEVGMVV IASHGYSGIK HFLHTNVAEA VANGAQCPVL VVK
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