Gene Sama_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2853 
Symbol 
ID4605100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3392500 
End bp3392931 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content53% 
IMG OID639782264 
Producthypothetical protein 
Protein accessionYP_928725 
Protein GI119775985 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.036432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAACA AAACAATACT GTGGCCCACT GACTTTACTG AAACGGCCTC CCATGCGCTC 
AGGTATGCGG TGGAAATGGC CAACCTGTAC AAGGTAGGGC TGAAAATTCT GCATGTGGTC
CCAAGACCCA TGGGGGATGA AAATTTCATG ATATTGGCGA TTACTCCGGA AGAACTCGCC
AAGAGCATGG AGGACGCGGC CGCCGAGAAG ATGACATCCT TGCTCGCCAA GCTCCACACG
GATTTGCCGG TTGAAACCCA AATCCGTATG GGGGAGGCAG CGGATGAAAT CATCGCCGAA
GCCAACAGCG GTGAGGTTGG CATGGTGGTT ATTGCCAGCC ATGGGTACTC GGGTATTAAG
CATTTTTTGC ACACCAATGT GGCTGAGGCT GTCGCCAATG GCGCCCAGTG TCCGGTACTG
GTGGTGAAAT AG
 
Protein sequence
MVNKTILWPT DFTETASHAL RYAVEMANLY KVGLKILHVV PRPMGDENFM ILAITPEELA 
KSMEDAAAEK MTSLLAKLHT DLPVETQIRM GEAADEIIAE ANSGEVGMVV IASHGYSGIK
HFLHTNVAEA VANGAQCPVL VVK