| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2838 |
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| Symbol | |
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| ID | 4605085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3375438 |
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| End bp | 3377153 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782249 |
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| Product | sulfite reductase subunit beta |
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| Protein accession | YP_928710 |
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| Protein GI | 119775970 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.7219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT ATCCAATTAA GCCTGAACTG CAGGTGCAGG GCCAGTTGTC TGATAACGAG
CGCCTGAAAG CTGAAAGCAA CCACTTGCGT GGCACTATCA CCACAGATTT AAAAGACGAA
ATTACCGGTG GTTTTACCGG TGATAACTTC ATGTTGGTGC GTTTTCACGG CATGTATCAG
CAGGATGACC GCGATTTACG GGCTGAACGC GCAGAGCAAA AGCTGGAGCC GCTGCACAAT
GTGATGCTGC GGGCGCGCAT GCCCGGCGGC ATTATCAAAC CTGAGCAATG GCTGGCGATT
GATGAGTTTG CCCGCGAGCA CACCATGTAC GGCTCCATTC GGTTAACCAC CCGTCAGACC
TTCCAGTTCC ATGGCGTGTT TAAACCGGAC ATCAAGCCGA TGCACCAGAT GCTGAATAAA
ATTGGCATCG ATTCCATTGC CACCGCCGGT GACGTAAACC GCAACGTGCT GTGTACCTCA
AACCCGGTGG AATCGGAGTT GCACCAGCAA GCCTATGAGT GGGCTGCGAA AATCTCTGAA
CACCTGCTGC CAAAAACCCG CGCCTATGCC GAGATTTGGC TGGGTGAGGA AAAAGTAGAA
ACCACGGAAA CCGAGCCGGT GCTGGGTGAT AGCTACCTGC CGCGTAAGTT TAAAACCACT
GTGGTGATCC CACCGCACAA CGATGTCGAC GTTCATGCCA ATGACCTGAA CTTTGTCGCT
ATTGCCGAAA ATGGCCAGTT GGTTGGTTTT AACGTGTTGG TTGGTGGCGG CCTTGCGATG
ACCCACGGCG ATAAATCGAC TTATCCGCGC CGGGCAGAAG ATTTGGGCTT TATCGGTCTT
GAGCATGTGC TGAAAGTCGC AGAGCACGTG GTGACTGTAC AGCGTGACTA TGGCGATCGG
GTTAACCGCA AAAATGCCAA AACCAAATAC ACCCTGGATC GTATCGGCGT GGACGCCTTC
AAATCTGAGG TGGAACAACG GGTTGGCGTA GCCTTTGGCC CAAGCCGTCC TTACGAGTTT
ACCCACCGCG GCGATCGCTT TGGTTGGGTG GAAGGCATTG ATGGCAAGCA CCATTTAACC
CTGTTTATCG AAAACGGCCG TTTGCTGGAT TACCCGGGTA AGCCGCTGAA AACCGGCGTT
GCTGAAATTG CCAAAGTGCA TAAAGGCGAT TTGCGCATGA CGGCAAACCA GAACCTCATC
ATCGCGGGGG TTGCCGCTGA AGATAAAGCG CAGATTGAGC AGCTGGCGCG CGAGCATGGG
TTGTTGGATA ACGTCACCAC CCAGCGCAAA AACTCGATGG CGTGCGTGTC ACTGCCAACC
TGTCCGCTGG CGATGGCCGA AGCCGAACGC TACTTGCCAA CGTTGGTCAC CCACGTTGAA
GGCATTTTAA GCAAGCACGG CATTGCAGAC GACCATATCA TCCTGCGCGT CGTGGGCTGC
CCCAATGGCT GTGGCCGCGC CATGTTGGCT GAAGCCGGTT TAGTGGGCCG TGGTCCGGGC
AAATACAACC TGTATCTGGG CGGTAACACT GCCGGTACCC GTATTCCAAA ATTGTATTTG
GATAACGTAG CCGAAGCGGA AATTCTGGCG GCACTGGATA GCTTGATTGG CCGCTGGTCT
GTTGAGCGCA ACCCAGGTGA ATGTTTTGGT GATTTTGTGA TTAGGGTGGG TGTTGTTGCC
GAAGTGAAAG TCAGTAAAAC CGACTTCCAC GCCTGA
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| Protein sequence | MSQYPIKPEL QVQGQLSDNE RLKAESNHLR GTITTDLKDE ITGGFTGDNF MLVRFHGMYQ
QDDRDLRAER AEQKLEPLHN VMLRARMPGG IIKPEQWLAI DEFAREHTMY GSIRLTTRQT
FQFHGVFKPD IKPMHQMLNK IGIDSIATAG DVNRNVLCTS NPVESELHQQ AYEWAAKISE
HLLPKTRAYA EIWLGEEKVE TTETEPVLGD SYLPRKFKTT VVIPPHNDVD VHANDLNFVA
IAENGQLVGF NVLVGGGLAM THGDKSTYPR RAEDLGFIGL EHVLKVAEHV VTVQRDYGDR
VNRKNAKTKY TLDRIGVDAF KSEVEQRVGV AFGPSRPYEF THRGDRFGWV EGIDGKHHLT
LFIENGRLLD YPGKPLKTGV AEIAKVHKGD LRMTANQNLI IAGVAAEDKA QIEQLAREHG
LLDNVTTQRK NSMACVSLPT CPLAMAEAER YLPTLVTHVE GILSKHGIAD DHIILRVVGC
PNGCGRAMLA EAGLVGRGPG KYNLYLGGNT AGTRIPKLYL DNVAEAEILA ALDSLIGRWS
VERNPGECFG DFVIRVGVVA EVKVSKTDFH A
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