Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2831 |
Symbol | |
ID | 4605078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3368450 |
End bp | 3369115 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639782242 |
Product | uracil-DNA glycosylase |
Protein accession | YP_928703 |
Protein GI | 119775963 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00406873 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.934783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTG CATGTTGGCA GGACTTTATT GCCGCCGAAT CCGAGAAACC TTACTTTAAA TCTCTCACTG AATTTGTTGC CGCCGAACGC CAAAGTGGCA AAACCATTTT TCCTCCTGAA GCAGAAGTAT TCGCGGCGTT TGAGCACACG CCATTGGATA AGGTGCGGGT CGTGCTGATT GGCCAGGACC CATACCATGG TGCCGGGCAG GCCCATGGAC TCTGTTTCTC GGTTAAGCCT GGTATTAAGC CGCCGCCCTC GCTGGTGAAT ATGTATAAAG AGCTCTCAGC CGATATCCCC GACTTTGAGA CACCGTCACA CGGGTACTTA CTGCCCTGGG CCAGACAGGG TGTGTTGATG CTCAACACCG TGCTCACGGT TGAGGAGGGC AAGGCACACT CCCACGCCAA GGCGGGCTGG GAAACCTTTA CAGCGGCCGC GCTTAAGCTG CTCAATGAGC GTGATACGCC GATTATCTTT GTGCTTTGGG GCAGCCATGC CATCAAGAAG GGCAAGGGTA TTACTGCGCC TCAGCATCAG GTGTTGTCGG GTGTGCACCC ATCGCCCTTA TCCGCCTATC GCGGCTTTTT TGGATGCGGC CACTTTTCGA AAATCAACGA GTTATTGAAA GCACATGGCG GTGAGCCCAT CGACTGGCGC CTGTAA
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Protein sequence | MAVACWQDFI AAESEKPYFK SLTEFVAAER QSGKTIFPPE AEVFAAFEHT PLDKVRVVLI GQDPYHGAGQ AHGLCFSVKP GIKPPPSLVN MYKELSADIP DFETPSHGYL LPWARQGVLM LNTVLTVEEG KAHSHAKAGW ETFTAAALKL LNERDTPIIF VLWGSHAIKK GKGITAPQHQ VLSGVHPSPL SAYRGFFGCG HFSKINELLK AHGGEPIDWR L
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