Gene Sama_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2792 
Symbol 
ID4605039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3331602 
End bp3332138 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID639782203 
Productacetyltransferase 
Protein accessionYP_928664 
Protein GI119775924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC AATCGCCCAG CATCTACCGA ACGACAGATG GCCGAATTCA GGTGCGCCAC 
AGCGACGCCA ACGACATTGG CGCCATTCGC GCCATTTACA GTCAGCCCAG TTGTTTTGCC
AATACGCTGC AGCATCCCTT TCCATCACTG GAGAAATGGC AGCGTCGTTT GGGAGATTTA
CCGGACAATT GCTACAGCCT GGTGGCTGAA ATCGATGGTG AGATAGTCGG GCAGGCCGGC
ATGGAGGTTT TCGCTAATCC AAGGCGAAAA CATGTCGCCA ATCTGGGTAT GGCCGTGAGT
GAAGATTATC AGGGCATAGG TGTGGGCTCG GCGCTGCTGG CTGCCATGAT GGAGCTGGCC
CACAACTGGC TGGCAGTCAG GCGCATCGAG CTTGAGGTCT ACACAGACAA CCACGCCGCC
ATCAAACTCT ACAAGCGCCA CGGCTTTGTA ATTGAAGGTG AGGCCATTGG CTACGCGTTT
CGGGGCGGCG AATACGTGGA CGCCTTTTTG ATGGCCAGTT GCCGCGACTT CGGCTGA
 
Protein sequence
MSAQSPSIYR TTDGRIQVRH SDANDIGAIR AIYSQPSCFA NTLQHPFPSL EKWQRRLGDL 
PDNCYSLVAE IDGEIVGQAG MEVFANPRRK HVANLGMAVS EDYQGIGVGS ALLAAMMELA
HNWLAVRRIE LEVYTDNHAA IKLYKRHGFV IEGEAIGYAF RGGEYVDAFL MASCRDFG