Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2777 |
Symbol | |
ID | 4605024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3319713 |
End bp | 3320942 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639782188 |
Product | aminotransferase, class V |
Protein accession | YP_928649 |
Protein GI | 119775909 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTT CCAGCCTTCG TAACCAGTTC CCTGCACTTG ACCAACACAT TGGCGACTAT CCGCTGGTGT ATCTGGACAC AGCCGCCACC AGTCAAAAGC CCCGGCAGGT TCTGGATGCC ATGGCGCACT TTCTGACCAC AGACAACGCC AACGTGCACC GCGCCGCCCA TACCCTGTCG GGCCGCGCCA CCGCAAGTTA CGAAGCCGTG CGGGATAAAC TCAAAGCCTT TGTCCATGCC GGCCGCCGGG AAGAAATTAT CTTCACCCAC GGCACCACAG AGGCCATCAA TCTGGTGGCC AATGGGCTTA AACACCGCCT TAATTCCGGC GATGTCATCC TGGTAGACAG CGCCGCCCAC CATGCCAATC TGGTGCCCTG GCAGCAGCTT GCCGCGCAAA CCGGTGCCAG GGTGGAAGCC ATTCCCCTGA CGGCAGAACT GCGTTTGGAT ACCGCCGCCT TCGAAGCACA GCTCGAAGCA GGCGCCGCCC TGGTGGCGCT CGGTCATGTA TCCAACGTGC TGGGCACAGT GAATGACGTC AACACACTCT GCGCCATGGC CCGCGCCAAA GGTGCCCTCA CGCTGGTGGA CGGTGCTCAG GCCGTGGCCC ACCAGCGGGT GGATGTGACC GATATCGGCT GCGACTTTTA TGTGTTCTCC GGCCACAAGA TGTATGGGCC CGATGGCGTG GGTGTGCTCT ATGGCCGCTA TGAGGTGCTC GATACCCTTA CGCCGCTTCT CACAGGTGGC GAGATGATAA AGACGGTAAG CTTTACCGGC ACCGAATTTG GCGAGCTGCC AAACCGGCTT GAGGCCGGCA CGCCGCCTAT CGTCTCTGTC ATCGGGCTTG GGGCCGCCAT CGACTTTATC AATAGCCTCG ACAGGCAAGC AGTACTGGCC CACGAGCATG ACCTTATGGC CCGGCTGCGT GCCGGGCTTG AGGCGGTGTT GCAAATCCGC ATTCACAGCC CGCGCGATGC TGCGGGGGCT GCCCCCAACA GCGGCGCCAT CGCCTTCAAC CTGGGGGATG AACATCATCA GGATGTAGGT ATCTTGTTGG ATCAACAGGG AATTGCAGTT CGCTGCGGCC ATCATTGCGC CATGCCGCTG ATGAGTCTGA TGGGCGTAAA AGGCTGCTGC CGTGCTTCCA TCGGCCTTTA CACCAGCCCG GATGATATCG ACCGTTTTCT CGCCGCCGTC AAAGAAGCGG CCGAACTCTT ATGCCCATGA
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Protein sequence | MNISSLRNQF PALDQHIGDY PLVYLDTAAT SQKPRQVLDA MAHFLTTDNA NVHRAAHTLS GRATASYEAV RDKLKAFVHA GRREEIIFTH GTTEAINLVA NGLKHRLNSG DVILVDSAAH HANLVPWQQL AAQTGARVEA IPLTAELRLD TAAFEAQLEA GAALVALGHV SNVLGTVNDV NTLCAMARAK GALTLVDGAQ AVAHQRVDVT DIGCDFYVFS GHKMYGPDGV GVLYGRYEVL DTLTPLLTGG EMIKTVSFTG TEFGELPNRL EAGTPPIVSV IGLGAAIDFI NSLDRQAVLA HEHDLMARLR AGLEAVLQIR IHSPRDAAGA APNSGAIAFN LGDEHHQDVG ILLDQQGIAV RCGHHCAMPL MSLMGVKGCC RASIGLYTSP DDIDRFLAAV KEAAELLCP
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