| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2771 |
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| Symbol | |
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| ID | 4605018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3310994 |
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| End bp | 3312388 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782182 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_928643 |
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| Protein GI | 119775903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGC CTCTGTATTT GGAGTCTTCC ATGTTCAGTA CCTTTGATAT TTACAAGATT
GGTATCGGGC CTTCGAGCTC CCACACTGTG GGCCCCATGA AGGCGGCGAA AGCCTTTGTG
GATAGGCTTG ATACCCTTAA TCTTTCAGGT CGGATTGATA GCCTGAAAGC CGACGTGTAC
GGGTCCCTGT CGCTCACCGG CAAGGGCCAC CACACTGACA TCGCCATTGT GCTTGGCCTG
ATGGGCCAAA GCCCGGAATG TGTGGATATT GATGCCATTG GGGCCACCAT AGCGGCCGTG
AATGAATCCG AAACCCTGTG GCTTGAAAGC GGCAGACCGG TGCGATTTGC CCGGGATGCC
ATGGTGTTTC ATCCCCATGC CTTGCCACTG CACGAAAACG CCATGACCCT GAGCGCCTTT
GCCGGGGATG AGCTGCTGGC ATCCAACACC TACTACTCCA TAGGTGGTGG TTTTGTGGTG
GAAGAGGCCG ACTTTGGCAA GGCTCAGATT GGTGAGACCT TGTTTCCGTA TCCTTTCGAG
GATGCCGAAC GGCTGGTGCA GCTATGCCGC GCCGAAGGGG TGAGCATTTC TACCTTGATG
CTGGCAAATG AAAAGGACTG CCACAGTGAA GAGTATATTT ACCGCGGATT TCGCGATATT
TGGCTGACCA TGAAGCAGGC CATTGACAGA GGCTGTCACA CCGAAGGTGT GCTTGCCGGG
CCGCTGCGGG TACCTCGCCG GGCCCCGGCG CTGCTTAAAC AGCTGGAAAC CAGCGGCCGT
ATCAGCGCCG ACCCAATGGA AATTGTGGAT TGGGTCAACC TGTTTGCCCT CGCCGTAAGT
GAAGAAAACG CCGCCGGTGG CCGGGTGGTG ACAGCGCCCA CCAACGGTGC GGCTGGTATT
ATTCCGGCGG TGATGGCCTA CTTTGACCGC TTTATTCAGC CCCTGGGGCA AAAGGAGTAC
AGCCGATTTT TGCTGGCATC TGCCGCCATC GGCAGCCTGT ATAAGCGTAA TGCCTCTATC
TCTGGCGCTG AAGTGGGTTG CCAGGGCGAA GTGGGCGTAG CCTGCTCCAT GGCCGCGGCG
GGCCTGGCCG AACTCATGGG TGCAAGCCCA GCGCAGGTGT GTATGGCCGC CGAAATTGCC
ATGGAACATA ACCTGGGGCT GACGTGCGAT CCGGTGGCAG GCCAGGTGCA GGTGCCCTGT
ATCGAGCGTA ATGCCATTGC GGCGGTGAAA GCCGTGAATG CTGCGCGCAT GGCGCTGCGG
CGCACTTCTG ATCCTCGTGT GAGCCTGGAT AAGGTGATTG CCACCATGTA CGAAACCGGC
AAAGACATGC ACGCCAAGTA TCGTGAAACC AGCCTGGGCG GCCTTGCCAT CAAGGTCACC
AGCATCTGTG ACTAA
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| Protein sequence | MASPLYLESS MFSTFDIYKI GIGPSSSHTV GPMKAAKAFV DRLDTLNLSG RIDSLKADVY
GSLSLTGKGH HTDIAIVLGL MGQSPECVDI DAIGATIAAV NESETLWLES GRPVRFARDA
MVFHPHALPL HENAMTLSAF AGDELLASNT YYSIGGGFVV EEADFGKAQI GETLFPYPFE
DAERLVQLCR AEGVSISTLM LANEKDCHSE EYIYRGFRDI WLTMKQAIDR GCHTEGVLAG
PLRVPRRAPA LLKQLETSGR ISADPMEIVD WVNLFALAVS EENAAGGRVV TAPTNGAAGI
IPAVMAYFDR FIQPLGQKEY SRFLLASAAI GSLYKRNASI SGAEVGCQGE VGVACSMAAA
GLAELMGASP AQVCMAAEIA MEHNLGLTCD PVAGQVQVPC IERNAIAAVK AVNAARMALR
RTSDPRVSLD KVIATMYETG KDMHAKYRET SLGGLAIKVT SICD
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