Gene Sama_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2723 
Symbol 
ID4604970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3258150 
End bp3259445 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content59% 
IMG OID639782134 
Product2-octaprenyl-6-methoxyphenol hydroxylase 
Protein accessionYP_928595 
Protein GI119775855 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA CCCGTCACAT CAACCCAACT GGCAGTGACA ATGCGCCTGC CGATGTGTCG 
AATTCAGCGC AGGCGGTCGA TATCGCTATC GTGGGCGGTG CCATGGCCGG TGCCACTCTG
GCGCTCGCCC TCGAGCAGCT CTGCAAGCTA TCAGACGCCC CCCTTTCCAT CGCCCTGATT
GAAGCCAGGG CGCCCGGCGA TGAACATCCC GGCTTTGATG CCCGCGCTAT CGCCGTTGCC
GAAGGCTCCA TTGAGGAGCT TAAGCGCCTC GGTGTGTGGC GACACCTGAG TCGGCTTGGC
ACCCCCATTA CCGATATTCA TGTCTCAGAC CGTGGCCATT TTGGTATGAC GGAGCTCAAT
AGCAGCGCCT TTGGTCTGCC TTATCTTGGG CAAGTGGTTG AGCTTGAGGC CGTGGGCAAA
GCATTGTTTG ATGCCATGGC CAAGACCCGT ATCCAACTGC TGTGCCCCGA TAGTCTGGTG
GGTATGGAGG CGGGTCAGGA TGCACACACC CTGCTGCTGG AGTCCGGTAA AAAGCTGAGT
GCAAAGCTTG TCGTCGCTGC CGATGGTTTG GGTTCTGCCG TACGCAGCCA CTTTAACTTA
CCGCTTGAGC AGGTGGACTT TGATCAGGAA GCTGTGATTG CCAATGTGGT AACCCGGCAG
CCCCATGAAC ATTGGGCGTG GGAGCGCTTC ACAGACACAG GGCCTTTGGC GCTGTTGCCC
ATGGCAGCTA TTAATGGGGA ACAGCGGCTC TCACTGGTGT GGGCCCTGCC TCCCGACGAA
GCCCGAATGC TGCAGGACTG CGATGAGCAA CGCTTTGTGA GTCAATTACA GCAGGCCTTT
GGCAACCGGG CCGGGGTCTT CCTTGGCGCC GGTAATCGTC AGCGTTATCC CCTGAAACTG
TCCTGGATGC CAAGACCCAT TCACCATCGC TGCGTGTTTG TGGGCAATGC CGCTCAAACC
CTCCATCCCA TCGCCGGTCA GGGCTTTAAC CTGGGCCTCA GGGATATTGT CGATTTGACC
CGGGTGTTGC AGCAGGCACT CAGTGAAAAC CGCCATGCAG ATGTGGGCGA TATTCGCCTG
CTGCATCGTT ATTTGACACT TCGCGAGCAC GACAGGCGTG AAACCCTGCT GGCCATCGAA
TCCCTGGTTC GGGGCTTTTC CAATCAATAT TGGCCGCTGG TGGCCGGGCG CAGTGTGGGA
CTTCGGCTGC TGTCCTGGTG TCCGCCGCTC AAGGCGCCGC TTGCAAGCCG GGCCATGGGC
TGGCGCCGTG GTGTCCGCCT GACGCCCAAC CTGTAA
 
Protein sequence
MDDTRHINPT GSDNAPADVS NSAQAVDIAI VGGAMAGATL ALALEQLCKL SDAPLSIALI 
EARAPGDEHP GFDARAIAVA EGSIEELKRL GVWRHLSRLG TPITDIHVSD RGHFGMTELN
SSAFGLPYLG QVVELEAVGK ALFDAMAKTR IQLLCPDSLV GMEAGQDAHT LLLESGKKLS
AKLVVAADGL GSAVRSHFNL PLEQVDFDQE AVIANVVTRQ PHEHWAWERF TDTGPLALLP
MAAINGEQRL SLVWALPPDE ARMLQDCDEQ RFVSQLQQAF GNRAGVFLGA GNRQRYPLKL
SWMPRPIHHR CVFVGNAAQT LHPIAGQGFN LGLRDIVDLT RVLQQALSEN RHADVGDIRL
LHRYLTLREH DRRETLLAIE SLVRGFSNQY WPLVAGRSVG LRLLSWCPPL KAPLASRAMG
WRRGVRLTPN L