Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2721 |
Symbol | gcvT |
ID | 4604968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3255570 |
End bp | 3256664 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782132 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_928593 |
Protein GI | 119775853 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0309145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAATA AAACTGTACT CTTTAGCAAG CACCTGGAAT CGAACGCCAA GATGGTGGAC TTCCACGGCT GGAATATGCC CCTCAACTAT GGCTCCCAAA TCGAAGAGCA CCATGCCGTG CGCCGTGACG CCGGTATGTT CGACGTATCT CACATGACTG TAGTGGACGT TGAAGGTGCC GATGCCCGCG CTTTCCTGCG CAAACTGCTG GCTAACGACA TTGCCAAACT GACCGTTCCC GGCAAAGCCC TCTACGGCGG CATGCTGAAC CACGACGGCG GCGTCATTGA CGACCTCATC ACCTACTATC TCAGCGACAC TCAATACCGC GTGGTAGTGA ACTCTGCTAC CCGCGAAAAA GATCTGGCGT GGATTGGTGA GCAGGCCAAA GGCTTCGATG TCACCATCAC CGAGCGTCCT GAACTGGCCA TGATTGCCGT GCAGGGTCCC AATGCCAAAG CCAAAGCCGC CACCGTATTT ACTGCCGAGC AAAACGCTGC TGTAGAAGGT ATGAAGCCTT TCTTCGGCAA GCAAGCTGGC AGCCTCTTTA TTGCCACCAC AGGTTACACA GGTGAAGCCG GCTACGAGAT CATCGTGCCA GAAGCCGAAG CCGAGGCCCT GTGGCAAGCC CTGCTGGATG CCGGTGTGCA GCCATGTGGT CTGGGTGCCC GTGACACCCT GCGCCTGGAA GCCGGTATGA ACCTCTACGG TCAGGACATG GACGAGAGCG TCAACCCACT GGCCGCCAAC ATGGGCTGGA CCATTGCATG GGAACCTGCG GATCGCGACT TTATCGGCCG TGAAGCGCTG GAAGCCATCA AGGCCAAGGG CAGCGACAAA TTAGTCGGTC TGGTGATGGA AGAGAAGGGC GTTCTGCGCC ATGATATGCC AGTGTTTTTT ACCGACGCCA ATGGCGTTGA GCACCAGGGC GTGATCACCA GCGGTACATT CTCACCCACT TTGGGCTATT CTATCGCGAT GGCTCGCGTA CCCGGCGCCA TCGGTGAGAC TGCCGAAGTG GAAATGCGCA AGAAGCGTGT GACGGTGCGT GTCATCGCAC CCAGCTTCGT ACGCAATGGA AAACAAGCAT TTTAA
|
Protein sequence | MANKTVLFSK HLESNAKMVD FHGWNMPLNY GSQIEEHHAV RRDAGMFDVS HMTVVDVEGA DARAFLRKLL ANDIAKLTVP GKALYGGMLN HDGGVIDDLI TYYLSDTQYR VVVNSATREK DLAWIGEQAK GFDVTITERP ELAMIAVQGP NAKAKAATVF TAEQNAAVEG MKPFFGKQAG SLFIATTGYT GEAGYEIIVP EAEAEALWQA LLDAGVQPCG LGARDTLRLE AGMNLYGQDM DESVNPLAAN MGWTIAWEPA DRDFIGREAL EAIKAKGSDK LVGLVMEEKG VLRHDMPVFF TDANGVEHQG VITSGTFSPT LGYSIAMARV PGAIGETAEV EMRKKRVTVR VIAPSFVRNG KQAF
|
| |