| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2681 |
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| Symbol | |
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| ID | 4604928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3210736 |
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| End bp | 3211917 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782092 |
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| Product | nitrite reductase (NO-forming) |
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| Protein accession | YP_928553 |
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| Protein GI | 119775813 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG AACAGCAATC TATCGAACAT GGCGTGGACA CCAACCGCAG ACAATTTCTG
GGTGGATCTG TGGGTGCTGG TCTGGTGGGA CTGGGGCTCG CTTCCGGACT AATGAGCAGC
CAGGCCAATG CCACCACCGC AGGTAACAAG GCCAAAAGCG ATCGCATGGC CAACTACACC
GCCGATCAAC TGGAGCGCGT AAAGCAGGAG CTGGTGCCGC CGCCAATGGT ACCCAAGCAT
GATCAGGTGG CCACGGGTAA ACCCAAGGTC ATTGAAGTCC GCCTCGAAGT AGAAGAAAAG
CAAATTGAGC TGGAAAATGG CGTGTTTGCC TGGGTGTGTG CCTTCAACGG CAGTGTGCCC
GGGCCACTCA TTGTGTGCCA CCAGCACGAT TACGTTGAGC TGACGCTGGT TAACCCCAAG
ACCAATGTGC TGTCACACAA CATCGACCTG CACTCAGCCA CAGGCGCGCT GGGCGGCGGC
GAACTGACTC TGGTTGCCCC CGGGCAGGAA GTCACCTTCC GCTTCAAAGC CACCAAGGCA
GGTACCTTTG TGTATCACTG TGCCCCGGGC GGCATCATGA TCCCCTGGCA CGTAGCCATG
GGGATGCACG GCGCCATCAT GGTACTGCCA AGGGAAGGCC TGAGCGACGG TGATGGCAAC
CCACTGCACT ACGACCGCGC CTATTACATT GGCGAAGCCG ACTTCTATGT GCCCAAAGAT
GCACAGGGCA ACTACAAGCG TTACAACCAA TTGATGGAGA GCATGGAAGA AGTGCTCACC
ACCATGAAGA CACTGCTGCC TTCCCACATA GTGTTCAACG GCGGGGTAGG TGCCCTCACC
GGCAAGCACG CCATGCCTGC CAAGGTGGGT GAGTCAGTGC TCTTTATCCA CTCCCAGGCC
AACCGTGACA CCCGCCCTCA CATCATCGGC GGCCATGGTG ACTATGTGTG GGCCGCAGGC
TCCTTTGCCG ACCGCCCACA ACGGGATCTG GAAACCTGGA TGGTGGCCGG TGGCAGCGCG
GCAGCTGCAC TCTACACCTT CCGTCAGCCC GGGCTGCACG CCTACGTTAA CCACAACCTG
ATTGAGGCCA TCATGAAAGG GGCTGCCGCC CACATCAAGG TAGACGGTGA GTGGGATGAC
AACCTGATGG TACAGGTGAG AAAGCCCAGC GCCATCGCAT AA
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| Protein sequence | MKNEQQSIEH GVDTNRRQFL GGSVGAGLVG LGLASGLMSS QANATTAGNK AKSDRMANYT
ADQLERVKQE LVPPPMVPKH DQVATGKPKV IEVRLEVEEK QIELENGVFA WVCAFNGSVP
GPLIVCHQHD YVELTLVNPK TNVLSHNIDL HSATGALGGG ELTLVAPGQE VTFRFKATKA
GTFVYHCAPG GIMIPWHVAM GMHGAIMVLP REGLSDGDGN PLHYDRAYYI GEADFYVPKD
AQGNYKRYNQ LMESMEEVLT TMKTLLPSHI VFNGGVGALT GKHAMPAKVG ESVLFIHSQA
NRDTRPHIIG GHGDYVWAAG SFADRPQRDL ETWMVAGGSA AAALYTFRQP GLHAYVNHNL
IEAIMKGAAA HIKVDGEWDD NLMVQVRKPS AIA
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