| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2607 |
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| Symbol | |
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| ID | 4606017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3121171 |
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| End bp | 3122796 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639782018 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928479 |
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| Protein GI | 119775739 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00122932 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGT TGCAAATTAA ACACAAGATG CTGCTGGGAT TTTTTATTCC GGTATTGCTG
CTCATCATCG TTTGCGGCGT CTCCATGAGT ATCATGTCGA AAATAGAAGA TGGTGTGCTT
CGCATCTATA ACGACAGAGT CGTTCCTCTG GAAGATCTCA AGCTTATTGG TGATGACTAT
GCCGTTTCTG TCATCGATGC CATCAATAAA GCCAATGCCG GAGGCTTTTC GGCGGAAGAG
GCCAGAAATG GTCTGATAGA AGCTAAAAAG AATATAGCCA GCCGCTGGGA CAAGTATATG
TCCACAGAAC TCACCGCTGA CGAGCAAAAA CTGGCCAGCC AAACCCAGCA GTTATTTGCA
CCTGCCAATC AGCAGATCCA ACTATTGATT GATAAACTCA GTGGCAAGTC AGGCAGTGTG
ACCGGACAAT TCAGTGCGGA TATTATCCCG CTTTACCAGG TAATAGACCC CATCAGCGGC
AAAGTCGCCG AGCTCGTCAC TCTGCAAATC CATATCGCTG ATCTGGAGCG GGAACAGGTA
GAAACATTAC ATTCGAGCTC ACTCAAATGG TTTATCGGGC TGGCCGTCTT TGCCGTTCTC
ATCACCAGTT TTTTCGGTGT CTGGGTCAAT CGAGGAGTAA TGACACCCGT AACCGAAATT
CGCCAAAAGC TTAGGCAGAT TCGGGAAAAA TCCGATATGA CAGTCAGCTT TACCGTATTC
CGCGATGATG AGCTGGGCCA TATCGCAAAA GATCTGAATG GCGTGGTGAA CCACCTCAAA
GGCATTTTAA AGAACATTGC CGAGGCCGCA TCGACATTGG GTGATTCTGC CGATGAGCTG
AATGAGTTTA CACGACAAGC CAATGACCGG ATGTTCAAAC AGCAATCCGA AACCGAACAG
ACTGCCACCG CCATGAATGA GATGACTGCC GCCGTTGCCG AGGTAGCCCA AAGCAGCAAC
TCAGCAGCAG AATCCGCCAG AAATGCCGAT GAAAGTGCAG CCAGAGGCAA CAGCATAGTA
CAGCAGTCCA TCAGCAGCAT GTCGGTGCTC GCGTCACAGA TTCAAGGAAC GGCCGCCGTG
ATAGGCGAAC TCGCCACCGA GAGCCAAAAC ATAGGACGGG TTCTGGATGT AATTAAGAGC
ATTGCCGAAC AGACCAACCT GCTGGCCCTG AACGCCGCTA TCGAGGCAGC CCGGGCGGGA
GAACAAGGAC GAGGATTTGC CGTGGTGGCC GATGAAGTCA GAACCCTGGC GCAGCGTACC
AGCGAATCGA CCCGCGAAAT CGAATCTATG ATTGAATCGT TGCAGCAAGG GGTGAAAAGC
GCTGTTAACT CCATGGAACA AGGTATTGCC CAGGTAGACA ATGCCAACGA GAGTACCAAC
GCCGCCGGCA GCGCACTGCA GGACATAGTG GCGAGTGTCG ATAGTATTAC CCAACTAAAT
ACCCACATAG CCACAGCCGC CGACGAGCAA AGCTGCGTCG CAGAAAGCAT CAATCAGAGC
ATCATCGCCA TCAGTGACAT AGCCCAGGAA TCGACTCAGG CAGCAAACGA TTTGAGTGAG
GCTGTTCATC AACTTGCACA ACTTGCAGGA CACATGCGTA CCCAGGTGGG GACTTTTATT
CTTTAG
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| Protein sequence | MNQLQIKHKM LLGFFIPVLL LIIVCGVSMS IMSKIEDGVL RIYNDRVVPL EDLKLIGDDY
AVSVIDAINK ANAGGFSAEE ARNGLIEAKK NIASRWDKYM STELTADEQK LASQTQQLFA
PANQQIQLLI DKLSGKSGSV TGQFSADIIP LYQVIDPISG KVAELVTLQI HIADLEREQV
ETLHSSSLKW FIGLAVFAVL ITSFFGVWVN RGVMTPVTEI RQKLRQIREK SDMTVSFTVF
RDDELGHIAK DLNGVVNHLK GILKNIAEAA STLGDSADEL NEFTRQANDR MFKQQSETEQ
TATAMNEMTA AVAEVAQSSN SAAESARNAD ESAARGNSIV QQSISSMSVL ASQIQGTAAV
IGELATESQN IGRVLDVIKS IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAQRT
SESTREIESM IESLQQGVKS AVNSMEQGIA QVDNANESTN AAGSALQDIV ASVDSITQLN
THIATAADEQ SCVAESINQS IIAISDIAQE STQAANDLSE AVHQLAQLAG HMRTQVGTFI
L
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