| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2603 |
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| Symbol | |
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| ID | 4604850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3114894 |
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| End bp | 3117467 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782010 |
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| Product | clpB protein |
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| Protein accession | YP_928475 |
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| Protein GI | 119775735 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0399134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAACAAATTC CAGATTGCCA TATCTGATGC TCAGTCTCTG
GCCCTTGGCA GAGACCACCA ATTTATCGAA CCCGTTCACC TGATGATGGC GCTGCTGAAT
CAGGACGGTG GCTCCATTCA TCCTTTATTA ACCCAGTCCG GCATTCGGGT GAGTAACCTG
CGCTCATTAT TGTCTCAGGA GTTGGAACGC CAACCACAGG TGGAAGGCAC CGGCGGTGAT
GTGCAGCTGT CGCAGGCGCT TATCCGTTTG CTGAACCTGT GCGACAAGCT GTCGCAAAAG
CGTAAAGACA AATACATCTC CAGCGAGCTG TTTGTGCTTG CAGCGCTGGA AGGTAACGAC
ACCTTGGCGC AAATCCTCAA GCAGGCGGGC GCGACCAAAG AGCGACTGGA GCAAACCATT
GAAGAAATCC GCGCTGGCCA GAAGGTGGAC GACCCCAACG CCGAAGATAA TCGTCAGGCG
CTGAAAAAGT ACACAGTCGA CCTGACCGAG CGCGCCGAGC AGGGCAAGCT TGACCCTGTG
ATTGGCCGTG ACGATGAAAT TCGCCGCACC ATTCAGGTAT TGCAGCGCCG CAGTAAAAAC
AATCCTGTCT TGATAGGTGA GCCCGGTGTG GGTAAAACCG CCATCGTCGA GGGGCTGGCC
CAGCGGATTG TTAATGGCGA GGTGCCGGAA GGCATCAAAA ACAAGCGGGT GTTGTCCCTG
GATATGGGCG CGCTGGTGGC CGGTGCCAAA TACCGCGGTG AGTTTGAAGA GCGCTTGAAA
GCGGTGCTCA ATGAGCTGGC TCAGGAAGAA GGCCAGGTTA TCCTCTTTAT TGATGAGCTG
CACACCATGG TGGGCGCCGG TAAGAGCGAT GGCGCCATGG ACGCAGGTAA TATGCTCAAG
CCTGCGCTGG CCCGCGGTGA GCTGCACTGC GTCGGCGCCA CTACTCTGGA TGAGTACCGC
CAGTATGTGG AAAAAGATGC CGCCCTTGAG CGCCGTTTCC AAAAAGTGCT GGTGGACGAG
CCCACAGTGG AAGACACCAT CGCTATTTTG CGTGGTCTCA AGGAGCGTTA CGAGCTGCAC
CACCATGTGG AAATTACCGA TCCTGCCATT GTGGCGGCAG CGAGCATGTC ACACCGCTAT
GTGTCAGACC GCAAATTGCC TGACAAGGCG ATCGATTTGA TTGATGAAGC GGCTTCCAGT
ATCCGGATGC AGATTGACTC CAAGCCTGAG TCGCTTGATC GCCTCGAACG CCGCGCTATT
CAGCTCAAGC TCGAAGAGCA GGCACTGGCA AAGGAAAACG ACGAGGCCAG CCGCAAGCGT
TTGGAGCATT TGCGCCATGA GCTGAAAGAG GTAGAAGCCA AGGCCAATGA GCTCAATGAA
ATCTGGCGTA CCGAGAAAGC CGCCCTGGCG GGCACCCAGC ATATTAAAGC AGACCTCGAG
CAGGCGCGTA TGGATCTGGA AGTTGCCCGC CGGGCGAGCG ATTTGACCCG CATGTCTGAG
CTGCAATATG GCCGTATCCC TGAGCTTGAA AAACAGCTCG ACTTGGCGGC ACAAGCTGAA
ATGCAGGACA TGAAGCTGCT GCGCAACAAG GTGACCGATG TGGAAATTGC CGAGGTGCTG
TCCAAGGCAA CCGGTATTCC CGTGGCCAAA ATGCTTGAAG GCGAGCGTGA AAAGCTGCTG
CAAATGGAAC ATGCGCTGCA TGAGCGGGTG ATTGGTCAGA ATGAGGCGGT GGATGCCGTG
GCGAATGCAA TTCGCAGAAG TCGCGCCGGG CTTGCTGACC CTAACCGCCC AATCGGCTCC
TTTTTGTTCC TTGGCCCGAC CGGGGTGGGT AAAACCGAGC TGTGTAAATC ACTGGCGAAG
TTTTTGTTCG ACACAGAGTC GGCGCTGGTG CGTATCGATA TGTCCGAGTT TATGGAGAAG
CATTCGGTTT CCCGGCTGGT GGGGGCGCCT CCGGGATACG TTGGCTACGA AGAAGGCGGT
TATCTTACCG AGGCGGTGCG CCGTAAGCCG TATTCGGTGA TTCTGCTCGA TGAGGTGGAA
AAGGCGCATC CGGATGTGTT CAACATCCTG TTGCAGGTGC TTGACGATGG TCGTCTGACC
GATGGCCAGG GCCGCACTGT GGATTTCCGC AATACCGTGG TGATCATGAC CTCGAACCTC
GGCTCAGACA TTATTCAGGA GCGCTTTGGT ACTCTGGATT ATGCCCAGAT GAAGCAAGAG
GTCATGAATG TGGTGGTACA CAGCTTCCGG CCAGAGTTTT TAAACCGGAT TGATGAAACG
GTTGTGTTCC ACCCGCTGGA CGCAGAGCAC ATCAAGAACA TAGCCTCCAT CCAAATCGAG
TCGCTGCGTA AGCGTTTGGC AGAGCGAGAG TTTGAACTCG AACTCAGTGA TGAAGCGCTG
GCCTTTATCG CCAGAGCCGG TTTTGATCCT GTGTATGGAG CGCGGCCTCT GAAGCGGGCG
TTACAACAAG AGGTTGAAAA TCCGCTGGCG CAGAAACTGC TGCGGGGTGA ATTTATCCCC
GGTAAACCCA TTCGGGTAGA CTGTCAGGAT GCTGAGTTGG TGTTCGCCCA ATAA
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| Protein sequence | MRLDRMTNKF QIAISDAQSL ALGRDHQFIE PVHLMMALLN QDGGSIHPLL TQSGIRVSNL
RSLLSQELER QPQVEGTGGD VQLSQALIRL LNLCDKLSQK RKDKYISSEL FVLAALEGND
TLAQILKQAG ATKERLEQTI EEIRAGQKVD DPNAEDNRQA LKKYTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL
DMGALVAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKSD GAMDAGNMLK
PALARGELHC VGATTLDEYR QYVEKDAALE RRFQKVLVDE PTVEDTIAIL RGLKERYELH
HHVEITDPAI VAAASMSHRY VSDRKLPDKA IDLIDEAASS IRMQIDSKPE SLDRLERRAI
QLKLEEQALA KENDEASRKR LEHLRHELKE VEAKANELNE IWRTEKAALA GTQHIKADLE
QARMDLEVAR RASDLTRMSE LQYGRIPELE KQLDLAAQAE MQDMKLLRNK VTDVEIAEVL
SKATGIPVAK MLEGEREKLL QMEHALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTESALV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDIIQERFG TLDYAQMKQE VMNVVVHSFR PEFLNRIDET VVFHPLDAEH IKNIASIQIE
SLRKRLAERE FELELSDEAL AFIARAGFDP VYGARPLKRA LQQEVENPLA QKLLRGEFIP
GKPIRVDCQD AELVFAQ
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