Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2573 |
Symbol | |
ID | 4604820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3080124 |
End bp | 3081392 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781974 |
Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
Protein accession | YP_928445 |
Protein GI | 119775705 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.447942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0738269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCCAA ACCCAGCGTT AGACACAATT ACACACCAAT GGGCACAGGT ATTTACAAAC GGCGGAGGTT TAGCTTCTTT GACTGACATG ATTGAACAGG ATGTAGTGGT GGTGGGCGGT GGCATGGTAG GGGCAGCCCT TGCTGCTGGC CTTGGCCGCG CCGGATTGTC CGTAACAGTG CTTGAAAACC ACATGCCACA GGCGTTTGAG GCGAGTCAGC CCCTGGATGT CAGAGTATCG GCCCTGAGTG TGGCCAGTGA AGCGCTGCTT GAGCGTCTGG ATGCCTGGGC AGGGATACTC TCCAGGCGCG CCGTACCTTA TCTTGGTCTT GAGACCTGGG AAATTGAATC CTGTATCACC CGTTTCCATG CCAGCCAGAT AGGCGCTGAC CATTTGGGAC ACATAGTCGA AAACCGGGTG GTGCAGTTGG CGCTTTGGGA CCTTTTGTCA ACGCTGGATT CAGTTACTGT TAAAGCCCCC GTTAACGTGA TGGGCTTCGA GCGCCTTGTG GATGAGGACG CCATTTGTGT CGCCCTCGAC TCCGGCGAGC GTATTAAAGC AAAGCTCTTG GTGGGCGCAG ATGGCGCCAA TTCCCAGGTG CGTGCTTTCG CTCATATTGG GGTGACGGGT TGGGACTATG CCCAGTCGGC CATGCTTATC AATATCGCCA CCGCCTGTGA GCAGCAGGAT GTGACCTGGC AGCAGTTTAC GCCCCAGGGC CCCCGTTCGC TGCTGCCACT GCCGGGCAAA AACGCGTCTC TGGTATGGTA TGACGACGCT TCAACCATTG CCCGGCTCGC GAAGCTGAAC CCTAACGAGC TGGCAGATTC AATCCGGGCC CATTTCCCCG CCCGCCTTGA TCGGGATTTT AGAGTGTTGG ACAAGGGGCA CTTTAAGCTG ACCCGCCGCC ACGCCCAGCG CTATTTCGAT GCCAATCTGG TGTTGATTGG CGATGCAGCC CACACCATTA ACCCCTTGGC CGGTCAGGGC GTTAACCTGG GCTTTAAGGA TGTTGATGTG CTGCTGGATG AAATTGTCAG TGCAGTGAAA AAAGGTGAAA ACTGGCATAC AAAATCAGTT CTGGAGCGTT ACCAGCAACG GCGCTGGCGT GACAATCAGC TGATGATGTC CACCATGGAT GCCTTCTATG CCTCGTTCAG CAATGACTTG TTGCCAGTTA AGTTGCTGCG CAATGCGGCG CTGCGGCTTG CCAATGTGGA TGGGCCCATC AAACGTCAGG TGCTGAAATA TGCCATGGGG TTGAAATAG
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Protein sequence | MWPNPALDTI THQWAQVFTN GGGLASLTDM IEQDVVVVGG GMVGAALAAG LGRAGLSVTV LENHMPQAFE ASQPLDVRVS ALSVASEALL ERLDAWAGIL SRRAVPYLGL ETWEIESCIT RFHASQIGAD HLGHIVENRV VQLALWDLLS TLDSVTVKAP VNVMGFERLV DEDAICVALD SGERIKAKLL VGADGANSQV RAFAHIGVTG WDYAQSAMLI NIATACEQQD VTWQQFTPQG PRSLLPLPGK NASLVWYDDA STIARLAKLN PNELADSIRA HFPARLDRDF RVLDKGHFKL TRRHAQRYFD ANLVLIGDAA HTINPLAGQG VNLGFKDVDV LLDEIVSAVK KGENWHTKSV LERYQQRRWR DNQLMMSTMD AFYASFSNDL LPVKLLRNAA LRLANVDGPI KRQVLKYAMG LK
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