| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2562 |
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| Symbol | |
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| ID | 4604809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3068495 |
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| End bp | 3069733 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781957 |
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| Product | hypothetical protein |
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| Protein accession | YP_928434 |
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| Protein GI | 119775694 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5505] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.198807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGG CGCCATTGGT TACCAACGAC GCAACCGTAC TGGGTTTTTT GGCCATTATT
CTGGGATTTG TGTTTTACAC CCACAGCCAC CCCAGCTGGC AAAAATTCTA TAAATTCGTC
CCGGCGTTGC TGCTGTGCTA CTTCCTGCCT TCGCTGCTCA ATACGTTCGG CATAGTCGAT
GGCCACAGCT CTCAGCTGTA CTTTGTCGCC ACCCGCTATT TGCTGCCCGC CTGTTTGGTG
TTGCTGATTC TGTCGGTGGA CCTCAAGGCC ATCATGGGGC TGGGGCCCAA GGCTGTGGTG
ATGTTCCTCT GCGGCACGTT GGGGATTGTG ATTGGTGGCC CGGTGGCGCT GCTGCTGGTG
TCGGCCATTG ACCCTTCGCT GACCAACGAT ATGGGGCCGG ACTCTGTGTG GCGTGGTATG
ACGACGCTTG CCGGCAGTTG GATTGGTGGC GGTGCCAACC AGGCGGCCAT GAAAGAAATC
TATGAAGTGG GCGGCAGTGT GTTTTCGGTC ATGATCACCG TCGATGTGAT TGTGGCCAAC
GTGTGGATGG CCGTGCTGCT GTTTATGGCA TCCCGCGCCA AAGAAATCGA TGCCAAAACC
GGCGCCGATA CCAGTGCCAT CGAAGCGCTT AAAGAGAAGG TTGAAAAGTA CAAGGCCGAA
AATGAGCGCA ATCCCAGCCT GACCGATTTA ATGCTTATTC TGGCGGTGGG CTTTGGTGTC
ACAGGTTTTG CCCATATTGC GGCGGATTTC CTGGCCCCCT TCTTTTCCGA GCACTTCCCC
TGGACCAAAC AGTACAGCCT GACTTCCGGC TTTTTCTGGC TGGTGGTGTT GGTGACGACC
GCCGGTTTGG CGCTGTCGTT CACACCACTG CGTCATCTGG AAGCCGCAGG AGCCTCCAAG
GTGGCGTCGT CCTTCCTCTA TGTGCTGGTG GCTACCATTG GCCTTCATAT GGATGTGAGT
GAAATCCTCA AGACCCCGAT TTACTTCCTG CTGGGCATCA CCTGGATGTT GGTGCACGCG
GGCTTTATGC TGCTGGTGGC CAAGCTTATC AAGGCGCCGT TGTTTTACAT GGCGGTGGGC
AGCCAGGCCA ACGTCGGCGG CGCTGCATCT GCTCCTGTGG TTGCTGCGGC CTTCCACCCC
TCTTTGGCAC CTGTAGGTGT GCTTTTGGCG GTGTTCGGTT ATGCTTTGGG CACTTACATG
GCGTGGCTCT GTGGCCAGCT CTTGCAGCTG GTGGGCTGA
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| Protein sequence | MTTAPLVTND ATVLGFLAII LGFVFYTHSH PSWQKFYKFV PALLLCYFLP SLLNTFGIVD
GHSSQLYFVA TRYLLPACLV LLILSVDLKA IMGLGPKAVV MFLCGTLGIV IGGPVALLLV
SAIDPSLTND MGPDSVWRGM TTLAGSWIGG GANQAAMKEI YEVGGSVFSV MITVDVIVAN
VWMAVLLFMA SRAKEIDAKT GADTSAIEAL KEKVEKYKAE NERNPSLTDL MLILAVGFGV
TGFAHIAADF LAPFFSEHFP WTKQYSLTSG FFWLVVLVTT AGLALSFTPL RHLEAAGASK
VASSFLYVLV ATIGLHMDVS EILKTPIYFL LGITWMLVHA GFMLLVAKLI KAPLFYMAVG
SQANVGGAAS APVVAAAFHP SLAPVGVLLA VFGYALGTYM AWLCGQLLQL VG
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