| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2537 |
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| Symbol | |
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| ID | 4604784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3045658 |
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| End bp | 3046455 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781932 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_928409 |
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| Protein GI | 119775669 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0946412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.964956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGA ATAAAGATTC GTTCGGAAGA ACGCTGTTTA TCGTTGTTGG CCTGTGTCTG
GTGTGCTCGA TTTTCGTATC GACTGCAGCC GTGTTACTGC GCCCAACCCA GCAGGAAAAC
AAGCTGCTGG ATAAGCAAAA GTACATTCTG GAAGCCGCCA ATCTGGTGGA TACCAAGGCC
GCTAACGTGA CCAAGGCTGA CATCCTGGCG ACTTACAACA AGTATGTTGA AGCCCGTGTG
GTGAACCTGA AGACCGGTGA GTTTGTGGAA GGCGTTGATG GCAATACCTT TGACCAGGAA
AAAGCTGCCC GCGATCCAAA GACCTCTTCC AAGCCAGAAC ACGATATTGC CTCTATTAAG
CGTGTGCCTG ATCAGGCTGT AGTGTATCTG GTGCGTGATG ATGCCGGTGC GCTCAAGACT
GTGATCCTGC CTGTGAAAGG TTATGGCCTG TGGTCTACCA TGTTTGCCTT CCTGGCTCTG
GAGCCGGATC TGAACACCAT TCAGGGTCTG GTTTACTACG ACTTCACAGG TTCAGGTGAA
ACTCCTGGTC TGGGTGGCGA AGTACAAAAT CCAAAGTGGA AAGCGCTGTG GCACGGCAAA
AAGCTGTTCG ACGAGCAGGG TAAACTGGCA ATCAGCGTAA CCAAAAACCC AGCAGTAGCT
GCATCTGTAC ACGGCGTTGA TGCCCTGTCC GGTGCGACTC TGACCAGTAA CGGTGTTCAG
CACTCGCTGA CGTTCTGGCT GGGTAAAGAA GGCTTTGCGA GTTTCATTGA AAAAGCACGC
AACGGAGGGC TGAGCTAA
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| Protein sequence | MAKNKDSFGR TLFIVVGLCL VCSIFVSTAA VLLRPTQQEN KLLDKQKYIL EAANLVDTKA
ANVTKADILA TYNKYVEARV VNLKTGEFVE GVDGNTFDQE KAARDPKTSS KPEHDIASIK
RVPDQAVVYL VRDDAGALKT VILPVKGYGL WSTMFAFLAL EPDLNTIQGL VYYDFTGSGE
TPGLGGEVQN PKWKALWHGK KLFDEQGKLA ISVTKNPAVA ASVHGVDALS GATLTSNGVQ
HSLTFWLGKE GFASFIEKAR NGGLS
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