Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2527 |
Symbol | |
ID | 4604774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3036239 |
End bp | 3037306 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781922 |
Product | DNA polymerase IV |
Protein accession | YP_928399 |
Protein GI | 119775659 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.598645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAA TCATTCATAT CGATATGGAC TGCTATTTTG CGGCCGTCGA GATGCGCGAT TTTCCACAAT ACCGCGGCAA ACCGCTTGCA GTAGGCGGCA GCAGTGACAG GCGAGGCGTC ATCAGCACCT GCAACTATGA GGCCCGAGCC TTTGGTGTAC GTTCTGCCAT GGCTTCGGCC TATGCCCTTA AACTGTGCCC GAATCTGATC CTGGTTCCCG GCCGGATGGA AGTGTACAAG GCCGTTTCGC AACAAATACG CGAAATCTTC AGTCGTTATA CCTCCCTTAT TGAGCCTCTG TCGCTGGATG AAGCCTATCT GGATGTGAGT GACTGCAGCT TGTATCAGGG CTCGGCCACC CGTATTGCCG AGGCGATTCG CAGTGACATA TTCAAAGAAA CCGGCCTGAC GGCTTCGGCG GGCGTGAGTC CTATCAAGTT TGTTGCCAAG GTCGCTTCGG ATCTTAATAA GCCCAATGGT CAGTATGTGG TGTCGCCCGA TACCCTGATG CACTTCGTCA GAGCCTTGTC CCTGGGGAAG ATCCCCGGTG TCGGTAAGGT CACCGAAGAA AAGCTCAATG CGCTGGGACT TAAAACCTGC GCCGATGTAC AGCAGGTGCC GCAGACGCTG CTGACAGAGC ACTTTGGTAA ATTCGGTGCC GTTTTGTATG AGAGGGCACA CGGCCGGGAT GAGCGGGCCA TCGTCTCCCA TCGTGAGCGA AAGTCCGTAG GGGTGGAGAC CACACTGCCC AAAGACTTGC ATACCCGTGA GGCCTGTCTG GATGTACTTT CATCACTCAT TCCTGAGCTC AATCGTCGTC TTGGCCGCAG CGCTTCGGGT CGTCGTATTC ATAAGCTGGT GGTAAAGCTC AAGTTTGATG ATTTTCGTCA GACCACCATA GAAAGCCGCG CCGAAGAGCC CTCAGTGAGA CTATTCGAAT CACTGCTCAG TCAGGCCTTT GTGCGTGCCG AGGGCAGGGG CATTCGCCTG GTGGGAATTG CGGCGGGCCT GGTTTGTCGG AGCGAGGCCG AACAGGAGGG CAGCGCCCAG TTGGCGTTAA GCCTTTAG
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Protein sequence | MRKIIHIDMD CYFAAVEMRD FPQYRGKPLA VGGSSDRRGV ISTCNYEARA FGVRSAMASA YALKLCPNLI LVPGRMEVYK AVSQQIREIF SRYTSLIEPL SLDEAYLDVS DCSLYQGSAT RIAEAIRSDI FKETGLTASA GVSPIKFVAK VASDLNKPNG QYVVSPDTLM HFVRALSLGK IPGVGKVTEE KLNALGLKTC ADVQQVPQTL LTEHFGKFGA VLYERAHGRD ERAIVSHRER KSVGVETTLP KDLHTREACL DVLSSLIPEL NRRLGRSASG RRIHKLVVKL KFDDFRQTTI ESRAEEPSVR LFESLLSQAF VRAEGRGIRL VGIAAGLVCR SEAEQEGSAQ LALSL
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