| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2511 |
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| Symbol | dnaK |
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| ID | 4604758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3015983 |
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| End bp | 3017896 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781906 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_928383 |
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| Protein GI | 119775643 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.127474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGA TTATCGGTAT CGACCTCGGC ACAACCAACT CTTGTGTAGC TGTGCTCGAT
GGCGGCAAGG CGCGAGTGAT TGAAAACGCT GAAGGCGATC GCACTACGCC CTCCATCATC
GCGTTTACTG AAGATGAAAC GCTGGTAGGC CAGCCTGCAA AACGCCAGGC TGTGACCAAC
CCAACCAACA CCTTCTTCGC TATCAAGCGT TTGATTGGTC GTCGTTTCAA AGATGACGAA
GTGCAGCGTG ATGTGAACAT CATGCCATTC AAAATCATTC AGGCTGACAA CGGTGATGCC
TGGGTGGAAA GCCGTGGCAA GAAGATGGCA CCTCCTCAGG TGTCTGCCGA AGTGCTGAAA
AAGATGAAGA AAACTGCAGA AGACTTCCTC GGTGAAGAAG TCACAGAAGC CGTTATCACA
GTACCTGCTT ACTTCAACGA TGCGCAGCGT CAGGCTACCA AAGATGCCGG CCGTATCGCA
GGTCTGGATG TGAAGCGTAT CATCAACGAA CCAACTGCTG CGGCACTGGC CTATGGTATC
GACAAGAAGC AGGGCGACAA CATTGTTGCC GTGTATGACC TCGGTGGTGG TACGTTCGAT
ATCTCCATCA TCGAAATTGA CAACAACGAT GGCGACCAGA CCTTCGAAGT TCTGGCCACC
AACGGTGACA CTCACCTCGG TGGTGAAGAC TTCGACAACC GTCTGATCAA CTATCTGGCC
GACGAGTTCA AGAAGGAGCA GGGTCTGGAT CTGCGTAACG ATCCTCTGGC CATGCAGCGT
CTGAAAGAAG CCGCTGAAAA AGCCAAGATT GAGCTGTCCA GCACCAACCA GACCGAAGTG
AACCTGCCGT ACATCACTGC CGATGCCACA GGTCCAAAAC ACCTCGTTGT GAAAGTGACC
CGTGCCAAGT TGGAGTCTCT GGTTGAAGAC CTGATCCAGC GCTCTCTGGA GCCTTTGAAA
GTGGCTCTGG CCGATGCTGA CCTGTCTGTG TCTGACATCA ACGAAGTGAT TCTGGTGGGC
GGTCAAACCC GAATGCCAAA GGTGCAGGAA GCGGTTACCA ACTTCTTCGG CAAAGAGCCT
CGTAAGGACG TAAACCCTGA CGAAGCCGTG GCCGTGGGTG CTGCCGTGCA GGCGGGCGTA
CTGGCCGGTG ACGTGAAAGA CGTACTGCTG CTGGACGTAA CCCCACTGTC TCTGGGTATC
GAGACCATGG GCAGCGTGAT GACCAAGCTC ATTGAAAAGA ACACCACCAT TCCTACCAAG
GCAAGTCAGG TGTTCTCCAC TGCCGACGAT AACCAGAGTG CCGTGACCAT TCACGTACTG
CAGGGTGAGC GTAAGCAGGC CAGCGCCAAC AAGTCATTGG GTCAGTTCAA CCTGGAAGGT
ATCGAGCCCG CTCCACGTGG CATGCCACAG ATTGAAGTCA CCTTCGACAT CGACGCCGAC
GGTATTCTGC ACGTTTCTGC CAAAGACAAG AAGACCGGCA AAGAGCAGAA GATCACCATC
AAGGCTTCTT CTGGTCTGTC TGATGAAGAA GTCGCCCAAA TGGTACGCGA CGCCGAAGCC
CACGCTGACG AAGACAAGAA ATTCGAAGAG CTGGCTCAGG CCCGTAACCA GGCTGACGGT
CTGGTACACG CGACCAAGAA GCAGGTGGAA GAAGCCGGTG ACGCGCTGGG CAGCGACGAC
AAGGCCAAGA TTGAAGCGGC CATTGCCGAA GTTGAAAAAG CAGTGAAGGG TAACGACAAA
GAAGCCATCG ACACTGCCAC TCAGTCACTG ATTGAAGCTT CTGCCAAGCT GGTAGAAATT
GCTCAGGCCA AGGCGCAGGG CGCCCAGAGC AGCGCTCAGG GTAGCTCTGC CGAGAAGACC
GCAGACGATG TGGTTGACGC CGAGTTTGAA GAAGTGAAAG ACGACAAGAA GTAA
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| Protein sequence | MGKIIGIDLG TTNSCVAVLD GGKARVIENA EGDRTTPSII AFTEDETLVG QPAKRQAVTN
PTNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIQADNGDA WVESRGKKMA PPQVSAEVLK
KMKKTAEDFL GEEVTEAVIT VPAYFNDAQR QATKDAGRIA GLDVKRIINE PTAAALAYGI
DKKQGDNIVA VYDLGGGTFD ISIIEIDNND GDQTFEVLAT NGDTHLGGED FDNRLINYLA
DEFKKEQGLD LRNDPLAMQR LKEAAEKAKI ELSSTNQTEV NLPYITADAT GPKHLVVKVT
RAKLESLVED LIQRSLEPLK VALADADLSV SDINEVILVG GQTRMPKVQE AVTNFFGKEP
RKDVNPDEAV AVGAAVQAGV LAGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK
ASQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLEG IEPAPRGMPQ IEVTFDIDAD
GILHVSAKDK KTGKEQKITI KASSGLSDEE VAQMVRDAEA HADEDKKFEE LAQARNQADG
LVHATKKQVE EAGDALGSDD KAKIEAAIAE VEKAVKGNDK EAIDTATQSL IEASAKLVEI
AQAKAQGAQS SAQGSSAEKT ADDVVDAEFE EVKDDKK
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