Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2505 |
Symbol | |
ID | 4604752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3010504 |
End bp | 3011316 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781900 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_928377 |
Protein GI | 119775637 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.146607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGAC AAGTAAGGGT AGCCGTGATT GGCGCCAGCG GTCGTATGGG CCGTGCACTG CTTGAAGCTT GTGACAATCA TGACGGCATC GTCCTTGGCG CCGCCATTGA GCGTGCCGGT TCGACCCTGG TTGGCGTCGA CGCCGGTGAA ATGGCTGGTA TTGGTCACCT TGGTCTGGCG TTGGTCGATA ATCTGGATGC GGTTGCCGAT AAGTTTGATG TTCTTATCGA CTTCACTTCA CCGGAAGGCA CTTTGGCCAA TCTTGAATGG TGTGCCCGGC AGGGTAAGGC GATAGTCATC GGTACCACCG GCTTTAACCA TGCGCAAAAA GAGCAGGTAG TGGCTTTTGC CGAAGAAACG CCCGTTGTCA TGGCGCCCAA CATGTCTGTG GGTGTAAACC TGATGTGGAA GCTGCTGGAA CTGGCGGCCA AAGTCATGGG TGATTACACC GATATCGAAA TCATCGAAGG GCACCACAGA CACAAGAAGG ATGCGCCGTC CGGTACCGCA CTCAAGATGG GTGAAGTGAT TGCCCAGGCT CTGGGGCGCG ATCTGGAAAA AGTGGCCGTC TATGGCCGCG AAGGCATCAC AGGTGAACGC GATCGCGAGA CCATTGGTTT CGCCACCATA CGTGCCGGCG ATCTGGTGGG TGAGCACACC GCCATGTTTG CCGATATCGG TGAACGACTG GAAATCACCC ATAAAGCATC CAGCCGTATG ACCTTTGCCA ACGGCGCCAT GCGTGCCGCC AAATGGCTTG CTGAACAAAA ACCTGGTCTT TACGACATGC AACAGGTGTT GGGACTTAAT TGA
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Protein sequence | MTGQVRVAVI GASGRMGRAL LEACDNHDGI VLGAAIERAG STLVGVDAGE MAGIGHLGLA LVDNLDAVAD KFDVLIDFTS PEGTLANLEW CARQGKAIVI GTTGFNHAQK EQVVAFAEET PVVMAPNMSV GVNLMWKLLE LAAKVMGDYT DIEIIEGHHR HKKDAPSGTA LKMGEVIAQA LGRDLEKVAV YGREGITGER DRETIGFATI RAGDLVGEHT AMFADIGERL EITHKASSRM TFANGAMRAA KWLAEQKPGL YDMQQVLGLN
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