| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2482 |
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| Symbol | |
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| ID | 4604730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2983409 |
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| End bp | 2984005 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781878 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_928355 |
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| Protein GI | 119775615 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.323969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG TGGTTCTCGC CAGTGGTAAC AAGGGTAAAC TGAAAGAATT CAATGAGATG
TTTTCTGAGT ATTCACTCTC GGTAGTAGCC CAGAGCGAGT TTCAGGTGCC AGACGTTGAA
GAAACCGGCA CTACCTTCGT CGAAAACGCC ATCATTAAAG CCCGCCATGC TGCAGCTATT
ACCGGCTTAC CCGCCATTGC CGACGACTCG GGGTTGGAAG TAGACGCCCT CGAAGGTGCC
CCTGGTATTT ACTCTGCCCG CTACGCAGGC GTTGGCGCTA AAGATACAGA CAATTGGCAA
AAGCTGCTGG GTGCCCTCGA AGGCAAAACC GAGCGCAGTG CCCGCTTCCA GTGTGTACTC
GTGTATATGC GCCATGCCAA AGACCCAACC CCCATTATCT GCCAGGCTGC CTGGGAAGGA
CGTATCGGTC TCGAAGCCAG GGGCGATAAT GGCCATGGTT ACGACCCTGT GTTTATCGCC
GAAGGCGGCG AGCTGACCGC AGCCCAGATG TCATCGGATG CGAAAAATGC TGTGAGCCAC
CGCGGCAAGG CCCTTGAAGC GCTGCTGGCT GAGTTCAGAA ACAAAGGCAT CATCTGA
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| Protein sequence | MKKVVLASGN KGKLKEFNEM FSEYSLSVVA QSEFQVPDVE ETGTTFVENA IIKARHAAAI
TGLPAIADDS GLEVDALEGA PGIYSARYAG VGAKDTDNWQ KLLGALEGKT ERSARFQCVL
VYMRHAKDPT PIICQAAWEG RIGLEARGDN GHGYDPVFIA EGGELTAAQM SSDAKNAVSH
RGKALEALLA EFRNKGII
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