| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2453 |
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| Symbol | |
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| ID | 4604702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2957271 |
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| End bp | 2959796 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639781850 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_928327 |
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| Protein GI | 119775587 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG TCCAGAGCCA AGACTCAACC CTCATCAGTG AAGATGCCGC CCGCGCACTG
GCCCGTGGCC AGTATGTGGA TGTCTTCTCC TTGCTGGGTA TGCACGCCGA CAATAACCAG
CTGGTGGTGC GCTGTTTTCT GCCGGGGGCA CTGGCGGTAG AGGTGCTCAG TGCCAAAGAC
GGTAAAAAGG TCGCCAGTCT CAGCGCTGAG GCCCGGGAGG GCATGTTTGC CGGGGTGATG
GGGCGCAGGG TCAAGCCCTT TGCGTATCTG CTGCGGGTAG CCTACCCAAG CCATGTGGAA
GATGTGTACG ACCCCTATGG CTTTGACAGC CTGCTGAGCG ACTACGACCT CTACCTGTTT
GGTGAGGGGC GTCAGCTTTA CGCCCAGGAC TTTTTGGGCG CCAATCCCAG AGAGGTGGAG
GGTGTGGCCG GGGTGCTTTT TGGCGTATGG GCGCCCAACG CCAGCCGGGT GTCTGTGGTA
GGGGATTTCA ACCACTGGGA TGGCCGTGTC CATGTGATGC GCTTTCATCC TGCCAGCGGT
GTGTGGGACA TCTTTATTCC CGGCGTGCAT GCCCATGCCC ACTACAAATT CGAAATAATG
ACCGCCGATG GTGAGCTGCT GATTAAGTCA GACCCCTTCG CCAAAACCAT GGAAGCGGCC
CCCAATAACG CATCCAGAGT CGCTCCCCAG TCATCCTTTG TCTGGCAGGA TCAGGACTGG
ATGCAGGCAC GGAATAAAGA CTGGCATCGC CAGGCCATGT CCATTTACGA GCTGCACCTT
GGCTCGTGGC GCCGTAAAGG TGAGGCTGGT GACACCTGGC TCACCTACCG TGAGCTTGCC
GATGAACTGG TGCCCTACGT GAAGTCACTG GGCTTTACGC ACATAGAGCT GATGCCCTTG
TCGGAATTCC CCTTCGATGG CTCCTGGGGC TATCAGCCGG TGGGGCTGTT TGCCCCCACA
CAGCGATTTG GCAGCAGCGA CGACCTGAAA TACCTGATTG ATGCCTGTCA CCGTGCCGGT
ATCGGTGTCC TGATGGATTG GGTTATTGCC CACTTCCCGG CGGATGCCCA TGGACTGGCA
CGCTTTGATG GCACCTGCCT GTATGAACAT CAGGACCCCC GCCGTGGCCG TCACCCTGAC
TGGGATACCC TGATTTTCAA CTACGGCCGC GCCGAGGTGC AGAGTTTCCT GTTATCGGCC
GCCACCGTCT GGCTGCGGGA TTTTCATATC GATGGGCTGC GCCTGGATGC GGTCTCTTCC
ATGTTGTATC TCGACTACAG CCGCAGCGAA GGCGAGTGGC TGCCCAACGC CGATGGCGGT
CGGGAAAACC ATGAGGCCAT TGAATGCCTC AAGCTGATAA ACAGCCGTCT GTACGGCGAG
TTTCCCGGTA TCGTGATGAT TGCCGAGGAA TCCACCGCCT GGGATGGCGT GTGTCGCCCT
GTCAGCGAGG GCGGATTGGG GTTTGGTTTT AAGTGGAACA TGGGGTGGAT GAATGACACC
CTGGCCTATC TTGGCAAAGA TCCAATTCAT CGCCGCTGGC ATCACCATCA ACTCACCTTC
GGCATCATGT ATGCCCACAG CGAGCAGTTT ATCTTGTCGT TAAGCCATGA TGAGGTGGTC
CACGGCAAGG CATCGCTGCT GTCGAAAATC CCCGGCGATG ACTGGCAGAA ATTTGCCACC
CTGCGTGCCT ATTACGGGTA TATGTGGGGT TTCCCCGGCA AGAAGCTGCT GTTTATGGGG
GGCGAGTTTG GTCAGCGGGA CGAGTGGAAC CACGACAAGA GCCTCGACTG GCACCTGTTG
CAGTACGCTC CCCATCAGGG GCTGAGCCTG TGGCTGGCTG ATCTCAATCG TCTCTATCAG
CGCCACACCG TACTTGGGCA AACGGATCAC GACCTGTCCC GCTTCTGCTG GCTGGATTGC
GACAATGCCG AGCAGGGGAT TTATGCCTTT GTCCGGGGTG AGGGCGATGA TGCCCTGGTA
TTTGTGGTGA ACATGACGCC CCAGCTGCAC CAGGGATATC GCCTGGGATT GCCCTGCGAG
GGTGACTGGC GCGAGCTGCT TAACAGCGAT GCCAGCTGCT ACGGCGGCTG CAACCAGGGC
AACGGCGGCG TGATTGTATG CACCCCTGAG CCCGCTGGCG GCAAGGCTCA AAGTGCTCTT
GTCACCATTC CTCCCCTGGG CTGCCTGGTG CTGGGGCTCA GCCGGGATAA ATCGCCCGCG
ATTTCGTCTG AGTCTTCAGC CGACAAAGCG CTACCCGTAA AAAAAGCCCC GGCCTCAACC
GCCCCGGCCT TAATCAAGGC CAAGCCAGGA ACCAAGACCA AGCCAGTAAC CCAGACCAAG
CCAGTAACCA AGGCAAAGGC TTCTACCACT GATAACGCGC CTGCCAAAGC TAAGTCCGGC
ACCAAGCCCA GCACTAAGCC CAGCACTAAG CCCAGCACTA CGCCCAGCAC TAAGCCCAGT
GCCAAGTCGG TGGCCAAAGC ACCGTCCAAC GCGGCAAAAA CCAAAGCTGA GGATCCCGGC
CTATGA
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| Protein sequence | MTSVQSQDST LISEDAARAL ARGQYVDVFS LLGMHADNNQ LVVRCFLPGA LAVEVLSAKD
GKKVASLSAE AREGMFAGVM GRRVKPFAYL LRVAYPSHVE DVYDPYGFDS LLSDYDLYLF
GEGRQLYAQD FLGANPREVE GVAGVLFGVW APNASRVSVV GDFNHWDGRV HVMRFHPASG
VWDIFIPGVH AHAHYKFEIM TADGELLIKS DPFAKTMEAA PNNASRVAPQ SSFVWQDQDW
MQARNKDWHR QAMSIYELHL GSWRRKGEAG DTWLTYRELA DELVPYVKSL GFTHIELMPL
SEFPFDGSWG YQPVGLFAPT QRFGSSDDLK YLIDACHRAG IGVLMDWVIA HFPADAHGLA
RFDGTCLYEH QDPRRGRHPD WDTLIFNYGR AEVQSFLLSA ATVWLRDFHI DGLRLDAVSS
MLYLDYSRSE GEWLPNADGG RENHEAIECL KLINSRLYGE FPGIVMIAEE STAWDGVCRP
VSEGGLGFGF KWNMGWMNDT LAYLGKDPIH RRWHHHQLTF GIMYAHSEQF ILSLSHDEVV
HGKASLLSKI PGDDWQKFAT LRAYYGYMWG FPGKKLLFMG GEFGQRDEWN HDKSLDWHLL
QYAPHQGLSL WLADLNRLYQ RHTVLGQTDH DLSRFCWLDC DNAEQGIYAF VRGEGDDALV
FVVNMTPQLH QGYRLGLPCE GDWRELLNSD ASCYGGCNQG NGGVIVCTPE PAGGKAQSAL
VTIPPLGCLV LGLSRDKSPA ISSESSADKA LPVKKAPAST APALIKAKPG TKTKPVTQTK
PVTKAKASTT DNAPAKAKSG TKPSTKPSTK PSTTPSTKPS AKSVAKAPSN AAKTKAEDPG
L
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