| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2446 |
|---|
| Symbol | |
|---|
| ID | 4604695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2943939 |
|---|
| End bp | 2944979 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639781843 |
|---|
| Product | cobalamin synthesis protein/P47K family protein |
|---|
| Protein accession | YP_928320 |
|---|
| Protein GI | 119775580 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTTG GGAATATCCC CGTCAATGTC ATCACAGGTT TTTTGGGCGC AGGTAAAACC
AGTTTTATCA AAAAATTACT GGCACAAAAG CCCGAAGGAG AAACCTGGGC CGTTCTGGTG
AACGAATTTG GCGAAGTCGG CCTGGATGCC GCCTTGCTGG GAAGCCGCGA GGGGCTGGCC
ATCCGTGAGG TGCCCGGGGG CTGTATTTGC TGCGCCGCCG GGGTGCCCAC CAGGGTGGCC
GTCGCTCAGC TGCTGAGGCA AGCCAAACCC AGCCGTCTTT TGATTGAACC CACGGGACTT
GGCCATCCTG CCAATATTCT CAAAACCCTG ATGGCTCCGG AGTATCAGGG GGTGTTATCC
ATCCAGCGCA CCCTGTGTTT GGTGGACCCG CGAAATCTTG ATGATGCGCG CTATACCCAA
AACGACATCT TCAACCAGCA GCTGGCGGTG GCCGATCTGG TGCTGGCCTG CAAGGCCGAT
ATGCAGGCTC CGGACTTTCT CGCGACCCTT GGCTCCTATG TCACAGACAT CAACCCCGGC
GTCTCCGTGC AGCCCTTTTC TGCTAAAACG CCTGTTTCCG ATACCCTGCT CACGGCCATG
ATGCAAGTAT CGATCAGGGC GCCGCAGCTG ATGTCCGCAG CTCTTCCCCG GGGCCTCTTT
GCCAGCAAAC CGTCAGGCAC CATGGGCCTC TTTGATGAAG GCGATGGCGC ACAGACTTTG
CAATTAAACT CACAAGGCTT TATCCGCAAA CCCCATCAGG CCGAAGGTAT TTTTGCCTGT
GGCTGGTGTT TCAGTGCCCA GTGGTGCTTT GACTTTGATG CCCTGATGGC CGTGGTCCAG
GCCAATCCCA GTCTGAGACT CAAGGCGGTG ATGATCACCC CGGATGGCAT TCTGGCCATT
AACCGGCTGG AGACAGAATT GAATCTGGCG GAGCTGGATG ATGCCATGGA CTCCCGCATC
GAATTTATTG CCACAGAGCC CCTCGACTGG GATGCCATTG AAGAAGCGCT GCTGACAAGT
GGCAGCCCAG TTGGCCAATA G
|
|---|
| Protein sequence | MLLGNIPVNV ITGFLGAGKT SFIKKLLAQK PEGETWAVLV NEFGEVGLDA ALLGSREGLA
IREVPGGCIC CAAGVPTRVA VAQLLRQAKP SRLLIEPTGL GHPANILKTL MAPEYQGVLS
IQRTLCLVDP RNLDDARYTQ NDIFNQQLAV ADLVLACKAD MQAPDFLATL GSYVTDINPG
VSVQPFSAKT PVSDTLLTAM MQVSIRAPQL MSAALPRGLF ASKPSGTMGL FDEGDGAQTL
QLNSQGFIRK PHQAEGIFAC GWCFSAQWCF DFDALMAVVQ ANPSLRLKAV MITPDGILAI
NRLETELNLA ELDDAMDSRI EFIATEPLDW DAIEEALLTS GSPVGQ
|
|---|
| |