Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2438 |
Symbol | ppnK |
ID | 4604687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2932197 |
End bp | 2933075 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781835 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_928312 |
Protein GI | 119775572 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000505876 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATCCC AATTCCACAC CATCGGCCTG ATCGGCAAAC CCCACCACAA CGGTACCAAC CTGACGCTCA AGCGTTTACA TCACTGGCTC GGCAGTCAGG GATATGAGGT GCTTGTGGAA GAAAGGGTCG CCGGTGAGCT GGGTGCCAAG GTCGAAGCGG TCGATTTATT GGCCATAGGC AATCGCTGTG ATTTGGCCAT TGTGGTGGGT GGCGATGGCA ATATGCTGGG CGCTGCCCGG GTGCTGGCCC GCTTCGATGT GGGCGTGATC GGGGTTAACC GCGGCAATCT GGGATTTCTG ACCGACCTGC CACCCGATGG CTTTGAAGAA AGCCTGGCGG CCGTGCTCGA TGGCGAGTTT ATCACCGAGC ACAGATTTCT GCTTGAAGCG GAAGTACACC GCCATGGCAC CATGAAAGCC AGTAACACCG CCGTCAACGA GGCCGTACTG CACCCGGGCA AAATTGCCCA CATGATTGAG TACGAAGTCT ATATCGACAA TCAGTTTATG TACTCTCAGC GTGCCGACGG CATGATAGTC TCTACCCCCA CAGGCTCTAC GGCCTACTCG CTGTCAGCGG GCGGCGCCAT CTTGACTCCC AACCTTCAGG CGCTGATTTT GGTGCCCATG TTCCCCCATA CCCTCTCCTG CCGCCCGATA GTGGTGGACG CTAATTCCAC CATCAAACTG GTGGTCTCAC CGGAAAATGG TGAGAACCTG GAAGTGAGCT GCGATGGTCA CGTCACCCTG GCTGTCTTGC CCGGGGATGA AATTTTTATT CGCCAAAGCA GTGAACGCCT GCGCCTGATC CATCCCAAAA ACTACAATTA CTTCCACGTA CTGAGAAACA AACTGGGTTG GGGCAGCAAA CTTTTCTGA
|
Protein sequence | MTSQFHTIGL IGKPHHNGTN LTLKRLHHWL GSQGYEVLVE ERVAGELGAK VEAVDLLAIG NRCDLAIVVG GDGNMLGAAR VLARFDVGVI GVNRGNLGFL TDLPPDGFEE SLAAVLDGEF ITEHRFLLEA EVHRHGTMKA SNTAVNEAVL HPGKIAHMIE YEVYIDNQFM YSQRADGMIV STPTGSTAYS LSAGGAILTP NLQALILVPM FPHTLSCRPI VVDANSTIKL VVSPENGENL EVSCDGHVTL AVLPGDEIFI RQSSERLRLI HPKNYNYFHV LRNKLGWGSK LF
|
| |