Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2401 |
Symbol | |
ID | 4604650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2884839 |
End bp | 2886356 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781798 |
Product | flavocytochrome c flavin subunit |
Protein accession | YP_928275 |
Protein GI | 119775535 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA AAATCAAACA AAGCCGCCGC GCCTTCCTCA AGGGAGGTCT GGCACTGTCA GCCGTTGGGC TGGCCCCCGC CGTGCTGGCC AAGTCCAGCG AAGATAACGC CATTCAGTGG GATGAAACCT TTGACGTTGT CGTGGTAGGC AGCGGTTTGG CGGGCACCTG CGCCGCCATC CGGGCAAAGG AAAATGGCGC CAAAAACACC ATTATTATTG AAAAAATGCC GGTACTGGGC GGAACGTCTG CCATCTCAGG TCTGAACTTC TCCGTGGTCA ACAGTCACCT GCAACAGGCA CAGGGGATTG AAGATTCTGC CGCACTTTTC GCCGAGGACA TCTCCAGGGC GGGCGGCTAT CAGAACCACA GAGCGCTGAC CCTGAAAATG GCCGATACCA CCACCCGGGT ATTGCCCTGG GCAATCGAGC GGGGTTGCCG TTTCCATGAC AAGTTAAAGA GCCTCGGCGG TCATTCGGTG CCACGGACAC TTTATCCTGT CAATGGCGGT GGCAAAGGCA TACTGCGCCC GCTGCGTCGC TTCTATACCC AGGACTTACA GGGCGACATC CGCCGCAGAG TCAAGTTTGA CAAGCTGCAT CTGAATGCCC GGGGCGAGGT CATGGGGATT CAGGTACGCG AACAGTACTT TTTTGACCCA AATCTGGGGA ATGACGACCG GGAAAACACC ACTGGCACCA TCAAACATTA TCGGGTGACC AAGGGTGTGG TCATGGCCGT GGGCGGCTAC AGCCGCGATG TGGAGTTCCG TGCCATGGAG TTTCCCAATA TTCGCGATTA CATCCCAACC ACCACTCACA GGGGCGCAAC CGCCGGTGCA CTCAAGTCTC TGGTTGCAGC CGGTGCACAG ACAGTCCATC TGTCTTTGAT GCGCTTTGCC TTTGATATCC CTACCGAAGA TTTGCAGTGG GGTGCCTTGG TCGACCCCAA AACGGGTCAG CGCTTTATCA GCGAAAAGAA CAACCGCCAG GTCGTGGCAG AAGCCATCTG CAACATCATG GACCGCAACG AGGGTCGCTT CCCGCTGAAT ATTTACGATC AGGATGGCAT CGACAACTTC CACGACAAAC AGCGCCTGCA CCTCGCTTTG GAGGAAGGCA TGATGGTGAA GTACGACTCC ATCGAGGCCC TGGCCAACGG GGAAGGCATC GATCTTACCG GGCTTGCGGC CACACTCAAG CGCTATAACG AGGATGCCCT GTCAGGCAAA GACAGCCAGT TCGGTAAAGA CATGGCCGCG TTGAAACAAG TGAGTGTCAA ACGAGCGCCT TTCTATGCCA TCAAGGCCCG TCCGAAATTC AACTACACCC AGGGCGGCGT ATTAATCAAT GAAAATGCCC AGGTCATCAA CAGGGACACA GCCCAACCCA TCAAAGGCCT TTATGCCTGC GGCGAAGCCA CGGGCGGGCT GTTCGGCCGA ATTCGATTAA CTGCCTGCTC CTGCCCCGAT GCGTTCGCAT TTGGGGTGAT TGCCGGTGAA CAGGTGGCCA AGGCCTGA
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Protein sequence | MNEKIKQSRR AFLKGGLALS AVGLAPAVLA KSSEDNAIQW DETFDVVVVG SGLAGTCAAI RAKENGAKNT IIIEKMPVLG GTSAISGLNF SVVNSHLQQA QGIEDSAALF AEDISRAGGY QNHRALTLKM ADTTTRVLPW AIERGCRFHD KLKSLGGHSV PRTLYPVNGG GKGILRPLRR FYTQDLQGDI RRRVKFDKLH LNARGEVMGI QVREQYFFDP NLGNDDRENT TGTIKHYRVT KGVVMAVGGY SRDVEFRAME FPNIRDYIPT TTHRGATAGA LKSLVAAGAQ TVHLSLMRFA FDIPTEDLQW GALVDPKTGQ RFISEKNNRQ VVAEAICNIM DRNEGRFPLN IYDQDGIDNF HDKQRLHLAL EEGMMVKYDS IEALANGEGI DLTGLAATLK RYNEDALSGK DSQFGKDMAA LKQVSVKRAP FYAIKARPKF NYTQGGVLIN ENAQVINRDT AQPIKGLYAC GEATGGLFGR IRLTACSCPD AFAFGVIAGE QVAKA
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