| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2379 |
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| Symbol | |
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| ID | 4604628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2856700 |
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| End bp | 2858166 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781776 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_928253 |
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| Protein GI | 119775513 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.591266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAACA ACGTTGGCGA ACCCAAGGGT GTGGATTATT GGACCAAGAG GATCAGTGAG
CAGGAAATGC CTGCCCTGTG CTCAACGGTA AAAACCCTGG AAAAGTTGGC AAAGGATGAT
GTCTCCTCTA TGGCGATACT GGGCCGTAGC GTGATGCACG ACAATGCCCT CACATCCCGA
ATCCTGCGCG TGGCAAACAG TGCGACCTAT AACAAAGGCA TCAGCCAGGT CACAACGGTG
AGCCGCGCCG CCGTGGTGTT GGGTTTTGAT ACCATTCGCA ATATTTGTAT TACCGCCAAA
CTGCTCTCCA GCTTGTTGGA AAATAAAAAT CTGACTCCCG GCGTGTATCA AAGGCTGCTG
AAACTCATGG CACGCTCGTT TCAGGCAGCG ATGTTGGCCA GGATGATGCT TGCTGCACAC
GATGAAGAAA TGCAGGAAGA AGCCTTTATT GCCGCGCTGT TATACCACCT CGGTGAAAGT
GCCTTTTGGA GCATGGGTGG CCCACTTGCC AATGAACTGG ACAGAGCCCT TGATGGTGTC
GAAGACCCTG CCGCAGTACT CACTCAGGTT CGTGAACATC TGGGGACCAG TTTCAGCCAG
CTGACCCAGG GGTTGGCCCG TAGTTGGGGG CTTGGTGAAG TGCTCATCAA ATCACTCAAC
AACCCCGATG AGCGGATGCC GGAAATCCGC GCCATTTTTG TGGCCAACAA GTTGGTGCAG
GAGCTGGCAG AAACCTATCC CGACCACGCC GAGCTTGAAA AACGGGTGCG TCAGGGGGCC
GAAATGATGG GGTTGAAACC CGATGATTTT AAGGCCAGGG CCATTCAATG TGCCAATGCG
ACTCACAAGC TGGCCGATGC CTATGGCGCC AAGGTATTGG TGGAGTTTTT ACCAAACCCC
AATCGCTTGA TGGAAAACCA GGAAAGTCTT AATGAAGGAC GCTGGCGCGA AGGCGATGTG
AATGTACAAC TGAAAAAGCT CCGTGAGCTC ACTGGCTTCG CGGTGGCCAA AGCCGATATC
AATCAGGTGA TGCAAACCAC GTTGGAAGGG ATATTAAACG GTGTTGGGGT GGATAGCTGC
GCCGTGCTGC TGTTGTCGCC CAGCCGCAAG ATGCTGCAGC CCCGTATCGT GCTGGGCGAC
AATGCTGACA ACATCAAGCG TGATTTTGTA ATCGATATTA CTGAGCCCGA TCATCTGTTT
CGCCATGTGA TTGATTTAAA GCAGCCCTTA AACATTGATT CCCCCGACTC CCCACGCTGG
CGGCTCAGTC TGGATGAGCC TCTACGCAAA CGTTTGGCCA AGAGTGGTTT TTTACTGGCG
CCACTGGAAA TGGACGGCAA GGTTATAGGG CTGTTTTATG CCGACAGGGG CGTATCGGGC
CGCAATTTTG GCGATGATGA GTTCGGCAGT TTTACGCACT TTACCCAACT CGCCAATGTG
TGTTTCTCGG TGGCCGTGCG TCACTGA
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| Protein sequence | MKNNVGEPKG VDYWTKRISE QEMPALCSTV KTLEKLAKDD VSSMAILGRS VMHDNALTSR
ILRVANSATY NKGISQVTTV SRAAVVLGFD TIRNICITAK LLSSLLENKN LTPGVYQRLL
KLMARSFQAA MLARMMLAAH DEEMQEEAFI AALLYHLGES AFWSMGGPLA NELDRALDGV
EDPAAVLTQV REHLGTSFSQ LTQGLARSWG LGEVLIKSLN NPDERMPEIR AIFVANKLVQ
ELAETYPDHA ELEKRVRQGA EMMGLKPDDF KARAIQCANA THKLADAYGA KVLVEFLPNP
NRLMENQESL NEGRWREGDV NVQLKKLREL TGFAVAKADI NQVMQTTLEG ILNGVGVDSC
AVLLLSPSRK MLQPRIVLGD NADNIKRDFV IDITEPDHLF RHVIDLKQPL NIDSPDSPRW
RLSLDEPLRK RLAKSGFLLA PLEMDGKVIG LFYADRGVSG RNFGDDEFGS FTHFTQLANV
CFSVAVRH
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