| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2375 |
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| Symbol | |
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| ID | 4604624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2852135 |
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| End bp | 2853574 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781772 |
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| Product | transporter, putative |
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| Protein accession | YP_928249 |
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| Protein GI | 119775509 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.229304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTT TACCCAGACT CAGTAGCGTG GGATTATTGC TTTTCCTGAC CTCTACCTCT
TTATGGGCAG AATTCTCTTT AAGTGAAATC CCACCTCTTG ACAATAAAAC CCCCATCACT
CTGGTGGCCG AAACCGGCTT CTGGACCGAC TACCTACAGA CAAAAATGCT ACCGGCATTC
ACCAGGCAAA CCGGCATTGA AGTGAAAGTG GTCAGTACAC AACTGGACGA CATGTTCAAT
TTGCAACAGG CCTCACTCAG GATGGCCAAA GGGGAATTCG ATTTACTGTC AATGGAAGCT
GGCTGGGCCA AAGAGTGGGC GGCCAATGGT TACACTGTGC CTCTGGAAGA GCTGGCAGGT
CTATATGACC CAGGCGGCAC CAAAGCCATG TCGCGCTATC TCGAGCCCTA TTATCCTTCG
CTGCTGAGCA TTCTGTCTTA TCGGGGAGAA GTTCACGCCA TCCCCTACAA CAATTACGTG
ATGGGCAATC ATTTTCGGCG CGATCTTTTT GAAAATGCTG ACGAACAAAA ACATTTCCTT
GAACGCTACG GCTATCCCCT CAAGGCGCCA GACACACTCG TGCAGCTTAA GGATATTGCA
GAGTTTTTTA CCCGAAAACC AGGCGACGTG CTCGCCGGTA AATTGCTGAA ACAGCCTTTC
TATGGTGTTG CGCTGATGTC CGGTAACAAG CCCCACATCA ACGATGAATT TTCAGCGATT
TTGTGGAGCA TGGGTGACCG TTGGTTTACC CCGGTTTATG AAGACAACGG GCGACTGAAT
CACTTCGAAG TCAGTCGTAA TCTGGATAAA AAGCTGCAGG TCGCCAATTA CTATCAGTCC
ATTAAGCCCT TTGCCATTCC GGCCGACGAC GCCTTTGCCT TTAACGAAGC CGCCGACGCC
CTCGCCAATG GCCGGGTGGC CATGTGGCCC TTTGCTTATA ACAACTTATG GCTTAAATCC
GCCGTCGTTG AGAAAAAAGT GGAAGGGGCA CGTCTCGATG TGGCTCAGGT AGCGGGAGGT
AAACCCTATG TTGGTGCCTA TGCCTTTGCA GTAAGTTACG ACAGCCGTAA CCCCGAAGCC
GCGTACTGGC TACTGAAGTA CATGGGTTCG TTTCAGGCAC AATATGATTA CGCCATGGGC
GGTGGTAATC CCTGTCGTAT TGATGTGGCA ACCCACACAG ATTTTCAGGC TCCTGGCCTG
AAAGCCATCG GCGGCGCATT TATGGCAAGC CACCAAGCGA ATCTGGCTTG GGCCGGTGAT
ATCCGCACCA TGGGACACTT TACCAGTTCA GTCATGGGGC AAATTTACCC GGAGCTTGCA
AAAACCTGCT TTGCCGTGAG CCGCCAACCC AGTCATGCCG GTCAATACTT CACCGAGCTC
AATCAAACTA TCCTGAGACT GCAAAATAGC CAGGGAGAAA CCGCGGCAAT GGAAAAATAG
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| Protein sequence | MALLPRLSSV GLLLFLTSTS LWAEFSLSEI PPLDNKTPIT LVAETGFWTD YLQTKMLPAF
TRQTGIEVKV VSTQLDDMFN LQQASLRMAK GEFDLLSMEA GWAKEWAANG YTVPLEELAG
LYDPGGTKAM SRYLEPYYPS LLSILSYRGE VHAIPYNNYV MGNHFRRDLF ENADEQKHFL
ERYGYPLKAP DTLVQLKDIA EFFTRKPGDV LAGKLLKQPF YGVALMSGNK PHINDEFSAI
LWSMGDRWFT PVYEDNGRLN HFEVSRNLDK KLQVANYYQS IKPFAIPADD AFAFNEAADA
LANGRVAMWP FAYNNLWLKS AVVEKKVEGA RLDVAQVAGG KPYVGAYAFA VSYDSRNPEA
AYWLLKYMGS FQAQYDYAMG GGNPCRIDVA THTDFQAPGL KAIGGAFMAS HQANLAWAGD
IRTMGHFTSS VMGQIYPELA KTCFAVSRQP SHAGQYFTEL NQTILRLQNS QGETAAMEK
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