| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2331 |
|---|
| Symbol | |
|---|
| ID | 4604581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2797037 |
|---|
| End bp | 2798035 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639781729 |
|---|
| Product | N-acylneuraminate-9-phosphate synthase |
|---|
| Protein accession | YP_928206 |
|---|
| Protein GI | 119775466 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2089] Sialic acid synthase |
|---|
| TIGRFAM ID | [TIGR03569] N-acetylneuraminate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.206004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGA CTTTTATCAT CGCCGAAGCG GGCGTAAATC ATAATGGCAA TATTGCTCTG
GCAAAGCAGC TAATTGACTC TGCAGTGGAA GCCGGCGTTG ATGCAGTAAA GTTCCAGACT
TGGAAAACCG AATTGCTTGT CAGCAAAGAT GCTGAAATGG CTGCATATCA GATTGAAAAC
ACACACAAAA AAGAGTCTCA ATTTGAAATG CTCAAGAGAC TTGAGCTGAG TTATCCCGAC
TTTATCGAGT TAAAGGCGTA CTGTGATACT AAAAATATCT TGTTCCTTTC AACCCCAGAC
GAGCATGAAA GCGCTCGTTT TTTAAACGGA TTACAGAGTG TCTTTAAAAT TGGATCCGGT
GAACTGACCA ACGTTCCATT CCTCAGGTTA ATTGCAGGTT TTGGTAAACC TGTGATCCTA
TCGACTGGCA TGGGATACCT TTCAGAAGTG GAACAAGCAC TGTTTGTGCT AACAGAAGCA
GGACTGGCAC TAACGGATAT AACGGTTTTA CATGCAACCA CCGACTACCC CACGGCGCCA
CAGGACGTAA ACTTACGTGC CATGCTGACT ATTCAAAATG CGTTTCCCGG AGTTAAGGTC
GGTTATTCCG ACCATACTTT GGGGATTGAA GTATCTGTCG CGGCAGTCGC CTTGGGTGCA
AGTATCATTG AAAAACATTT TACGCTGGAT AAAGCAATGC CGGGCCCCGA TCACAAAGCG
AGCCTTGAAC CTGCTGAACT GAAAGCGTTG GTGCAAGCCA TTCGAAATGT CGAAGCATCC
CTTGGGGATG GCCGAAAGCT CCCCACGTCA ACTGAAATGG TTAATCGAAA GCTCGTCAGA
AAAAGTATCA TCGCAAATAC TTATATCAGC GCGGGCACAG AGATAACCGC CGATATGTTG
GATGTCAGAC GTCCGGGAGA TGGAATTTCC CCTTCTCGCT GGGATGAGGT AATCGGCAGT
ATCGCCAAAA AGGACTATCA ATCAGGAGAC CTCATTTAA
|
|---|
| Protein sequence | MVKTFIIAEA GVNHNGNIAL AKQLIDSAVE AGVDAVKFQT WKTELLVSKD AEMAAYQIEN
THKKESQFEM LKRLELSYPD FIELKAYCDT KNILFLSTPD EHESARFLNG LQSVFKIGSG
ELTNVPFLRL IAGFGKPVIL STGMGYLSEV EQALFVLTEA GLALTDITVL HATTDYPTAP
QDVNLRAMLT IQNAFPGVKV GYSDHTLGIE VSVAAVALGA SIIEKHFTLD KAMPGPDHKA
SLEPAELKAL VQAIRNVEAS LGDGRKLPTS TEMVNRKLVR KSIIANTYIS AGTEITADML
DVRRPGDGIS PSRWDEVIGS IAKKDYQSGD LI
|
|---|
| |