| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2324 |
|---|
| Symbol | |
|---|
| ID | 4604574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2787911 |
|---|
| End bp | 2788366 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639781721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928199 |
|---|
| Protein GI | 119775459 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3018] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.498229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.209106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT GGATTTACAC CTGTTTGGCG TTGGTGTTTT TAGCCGGTTG TGCAAGCAGT
GATGACCGTT ATGTACAGTG GGAAACAGAG GCGCCTGCCA GTTTTCCCAA GTTGACCGCT
ATTGGTTACG CGCCTTTGGC AACCCAACCC GCCAAAACCC AGGCCGAAAA GGTGTTAATG
GCGATGCAGG CCTCCAAACT TGCGGCATAC CGAGAGCTGG CAGAGCAGGT TTACGGTCAA
AAAATCAGTG CCGGCGCCAG CGTGAATGAT TGGGCCATGG GCAGTGACAG CATTAAAGCG
TCAGTATCGG GCGTGATAAG AGGAGCCAGA GTGGTCAAGG CTTATCCAGT TGGCGAGCAT
TATGTGACTG AGCTGGAACT GGATTTTGCT CGTGTGTGGG ATATCTATCA GCAGCAGAAT
CGTCCCTCGA AGGTGAAGGA AGTGACTTAC TTTTAA
|
|---|
| Protein sequence | MKKWIYTCLA LVFLAGCASS DDRYVQWETE APASFPKLTA IGYAPLATQP AKTQAEKVLM
AMQASKLAAY RELAEQVYGQ KISAGASVND WAMGSDSIKA SVSGVIRGAR VVKAYPVGEH
YVTELELDFA RVWDIYQQQN RPSKVKEVTY F
|
|---|
| |