Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2306 |
Symbol | |
ID | 4604556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2771108 |
End bp | 2771926 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639781703 |
Product | flagellin-like protein |
Protein accession | YP_928181 |
Protein GI | 119775441 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.228125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATTA CAGTAAACAC CAACGTCACT TCAATGAAGG CGCAAAAGAA CCTGACCTTG TCTAACCGTG ATCTGGCAAC CTCCATGGAG CGTCTGTCTT CCGGTCTGCG CATTAACAGT GCCAAAGATG ACGCCGCAGG TCTTGCCATC TCCAACCGTC TGAACAGCCA GGTTCGTGGT TTGGAAGTGG GTATGCGTAA CGCCAACGAT GCTATCTCCA TCGCCCAGAT TGCCGAAGGT GCGATGCAGG AGCAGACCAA CATGCTGCAG CGTATGCGTG ACCTGTCTAT TCAGGCAGAG AACGGTGCCA ACAGTGCAGA TGACTTAACC TCTCTGAAAA ATGAGATGGA CCAGCTGGCG CTGGAAATCA CCGCCATCGG TAACACCACA GCTTTCGGTG ACACCAAACT AATGACCGGC GGATTCTCAA ATGGCAAGAA GTTCCAGGTT GGTCACCAGA ATGCTGAAGA TGTTACTGTT ACTGTGAAGA CCAACAACGC TGGCACCTTG TCTGTTGGAG CCTTGGATGT GACTACATCT GGTGGTCGTA GCACTGCAAT GCTCAAAATC GACGCTGCTA TCAAGAGCAT TGACACTCAG CGCGCTTCAC TCGGTGCTAT CCAGAACCGT CTGGCTCACA ACATCAGCAA CAGTGCCAAC ACCCAGGCCA ACGTTGCTGA CGCCAAGAGC CGTATCGTGG ATGTGGACTT CGCCAAAGAA ACCTCTACCA TGACCAAGAA TCAGGTACTG CAGCAGACTG GATCTGCCAT GCTGGCCCAG GCCAACCAGT TGCCTCAAAT CGCCCTGTCT CTGCTGTAA
|
Protein sequence | MAITVNTNVT SMKAQKNLTL SNRDLATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG LEVGMRNAND AISIAQIAEG AMQEQTNMLQ RMRDLSIQAE NGANSADDLT SLKNEMDQLA LEITAIGNTT AFGDTKLMTG GFSNGKKFQV GHQNAEDVTV TVKTNNAGTL SVGALDVTTS GGRSTAMLKI DAAIKSIDTQ RASLGAIQNR LAHNISNSAN TQANVADAKS RIVDVDFAKE TSTMTKNQVL QQTGSAMLAQ ANQLPQIALS LL
|
| |