Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2266 |
Symbol | |
ID | 4604516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2731622 |
End bp | 2733094 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639781663 |
Product | amino acid/peptide transporter |
Protein accession | YP_928141 |
Protein GI | 119775401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000291592 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00874925 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAA ATTCCCAGGG TACGATGCTC GGGCATCCAA AGGGGCTGTT TCTGCTGTTC ACAACGGAAC TGTGGGAACG ATTCAGTTAT TACGCCATGC GTGCCATTTT GGTGCTGTAT CTGGTTGACC GCGTACAAAG TGAGGGCGGT CATGGCTTAG GTTGGAGCCA AGCCGATGCA ATTTCTCTGT ACGGTACTTT TACCGGCTTG GTGTACCTCA CCCCGCTGCT GGGTGGCTGG TTAGCCGATA ATTTCCTTGG TCAACGTAAA GCCATCATGA TTGGCGGCAC CCTGATGGCT GCCGGCCAAT TTATTCTGGG TACTCCACAC GCCTGGGTTC AAGGCATGGA GACCGAAGTA TTCTACCTGG GTCTGGGTGT CCTTATCCTC GGTAACGGTC TGTTCAAGCC CAACATTTCT ACCATGGTGG GTGATCTGTA TGCCGAAGGC GACCATCGCC GTGACGGCGC CTTTACCATC TTCTACATGG GTATCAACGT AGGCGCCTTC CTGTCAGGTA TCATCGTTGG CTCTGTAGTG AGCGCTTATG ATGGTAACTT CCAGGCTGGC TTTATCTGTG CCGGTATCGG AATGGTGCTT TCACTCATTA TCCAATTCCT GTTTGCCCAA AAGTTGCTGG GCAATATCGG TACTGTGCCT GCTGCCAAAC TTGAGAAGCA AAAAGACGAG GCCCGCGGTC AGGTGCGTAA AGAGCCGCTG ACTAAAGTTG AGCGCGACCG TATCAAAGTG ATCATGGTGA TGGGTCTGTT CACCATCGTA TTCTGGGCAG GTTTTGAACA GGCCGGCGGC CTGATGAACC TGTTTACCAA CGATTTTACC GACCGCATGA TTGGCAGCTG GGAAGTACCC ACTACCTGGT TCCAATCTCT GAACGCCATG TTCATCGTGA TTTTTGCCCC TGTGGTTGCT TCTATTTGGG TACGCCTGGG CGACCGTGAG CCAAACTCAC CGGTTAAATT TGCGCTTGGC TTGGTTCTGC TGGCCATTGG CTTCCTGTTT ATGATTGGTG CCGTGGTTGA GATGGGTGGT GACCCAACTG CCAAGTCCAG CATGTGGTGG CTGGTTGGTG CCTACTTCTT CCACACCATG GGTGAACTGT GCTTGTCTCC AATCGGTCTG TCTATGGTGA CCAAGCTCGC TCCCCTGCGC ATTGTATCGC TGATGATGGG GGCATGGTTC CTGTTCATCG CCGCGGCCAA CAAGATTGGT GGTGTCGTTG GCTCCTTTAT CGGTCATGGT GGTGAGAAAG AAGAGCAGCT GGCAAATGCC ATGTCTATCT TCGCCGGTAT CGCCATCACC GCCGCTATTT CAGGTGTGAT CCTGTACTTC ATGGCTGACA AACTGGTTGA TTGGATGCAC GGCGCCGAAA GCAAAGTGCA CCACACCGAA GAAGAAGCCC TTGAAGAGGA AATCGCCGTT ACCGGCGAGC ATGAAGCGAT GAAGCGCAGC TGA
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Protein sequence | MSENSQGTML GHPKGLFLLF TTELWERFSY YAMRAILVLY LVDRVQSEGG HGLGWSQADA ISLYGTFTGL VYLTPLLGGW LADNFLGQRK AIMIGGTLMA AGQFILGTPH AWVQGMETEV FYLGLGVLIL GNGLFKPNIS TMVGDLYAEG DHRRDGAFTI FYMGINVGAF LSGIIVGSVV SAYDGNFQAG FICAGIGMVL SLIIQFLFAQ KLLGNIGTVP AAKLEKQKDE ARGQVRKEPL TKVERDRIKV IMVMGLFTIV FWAGFEQAGG LMNLFTNDFT DRMIGSWEVP TTWFQSLNAM FIVIFAPVVA SIWVRLGDRE PNSPVKFALG LVLLAIGFLF MIGAVVEMGG DPTAKSSMWW LVGAYFFHTM GELCLSPIGL SMVTKLAPLR IVSLMMGAWF LFIAAANKIG GVVGSFIGHG GEKEEQLANA MSIFAGIAIT AAISGVILYF MADKLVDWMH GAESKVHHTE EEALEEEIAV TGEHEAMKRS
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