Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2180 |
Symbol | |
ID | 4604430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2636912 |
End bp | 2637628 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639781565 |
Product | hypothetical protein |
Protein accession | YP_928055 |
Protein GI | 119775315 |
COG category | [S] Function unknown |
COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000267555 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0119048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGC CTCTTACTCC CGCCGCCCTG GTGCTGGGCG CTTTCCTGGC TGGCGGTCTG GGATTTATCG GACACAGCAT TACTGAAGCC GCCACCAATT TAAAAGCCCT TGACCGCACG GTCAGCGTCA AGGGGCTGGC CGAGCAGGAG GTGATGGCCA ACGTAGCCAT CTGGCCAGTA CGTTTTGCCG AAGTCGACAA CGATTTGGCA AGCCTCTACA ACACAGTGCA GCAAAAAACC GACAAGGTGG TGGCCTTTTT AAAAGCCCAG GGGTTCAGCG ACGATGAAAT CACCCTGACA ACACCTGCTA TCGAAGACAG AAGCACCCAG GGCTACTCCG ACCCCAACCT CAAATATCGC TACGCAGCCA GAGTCACTGT CTCGCTCTAT ACCCATCAGG TCGATAAATT GCTACAAGCC CGAAAACACA TCGGCGTGCT CGCCCGTGAT GGCATCGCCA TTGGCGGCAA CGAATACGAA TCCCGCAGCG AGTTCTTATT CACTGAGCTC AACCGCATCA AACCGGCCAT GGTGCAACAG GCCACCGAAA ACGCCCGGGA AGTAGCCGAG AAATTTGCCA GGGACTCAAG CTCAAGCCTT GGCAAAATCA AAACCGCCAG CCAGGGGCAA TTTATCATCA CTGACAGGGA CAGTAATTCG CCCCATATTA AAAACGTGCG AATTGTCAGT ACGGTTACCT ATTATTTAAC TGACTGA
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Protein sequence | MDKPLTPAAL VLGAFLAGGL GFIGHSITEA ATNLKALDRT VSVKGLAEQE VMANVAIWPV RFAEVDNDLA SLYNTVQQKT DKVVAFLKAQ GFSDDEITLT TPAIEDRSTQ GYSDPNLKYR YAARVTVSLY THQVDKLLQA RKHIGVLARD GIAIGGNEYE SRSEFLFTEL NRIKPAMVQQ ATENAREVAE KFARDSSSSL GKIKTASQGQ FIITDRDSNS PHIKNVRIVS TVTYYLTD
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