Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2161 |
Symbol | |
ID | 4604411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2610899 |
End bp | 2611429 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639781546 |
Product | hypothetical protein |
Protein accession | YP_928036 |
Protein GI | 119775296 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.931717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGA TTATCTCCCA CGAAGGCCTG GAGGATTTTC AGGCGCTGGT CGATGGCATT CGCCCTCTGA CCCAGGACAA ACAACACTTT GGCACGCCGC TGAAAACCAA GGCCGAGCTC ACGGAGCAGG CGCCACAGCT CGCGGCCAAT CATTATTTCT CCGATACCTT TCAGCCGCTA TTGCCGGTAG ATGGCCCCAT GCGCTGGCGT GCCGAACATG CGGATAATCT GGTGCTTAAA CGCTTGCGCC GGGGCGATTA TGTGCCTGAT TTGATTTTGG ATGTGCACGG CATGCGTCAA ACTGAGGCCA AGCTTGAACT TGCAGCGCTT ATTGAAGCGG CCATTCGCGA GCAGTGCCAG TGTGTGAGTG TGATGCACGG CTATGGCACT GGAGTGCTGA AACAGCAGAT CCCCCTGTGG CTGGCACAGC ATCCCAAGGT GTTGGGATTT CATCAGGCCC CCAAAGAATG GGGCGGCGAT GCCGCACTGC TGGTGTTGAT TGACCTGGGC GACCAGCCCC ACCGGCGCTG A
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Protein sequence | MTKIISHEGL EDFQALVDGI RPLTQDKQHF GTPLKTKAEL TEQAPQLAAN HYFSDTFQPL LPVDGPMRWR AEHADNLVLK RLRRGDYVPD LILDVHGMRQ TEAKLELAAL IEAAIREQCQ CVSVMHGYGT GVLKQQIPLW LAQHPKVLGF HQAPKEWGGD AALLVLIDLG DQPHRR
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