Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2127 |
Symbol | |
ID | 4604377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2572267 |
End bp | 2572887 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639781512 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_928002 |
Protein GI | 119775262 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAT TTTTTTATGT GCATGAGGTG AATCCTCAAA AACGCTTGAT AGATCAGGCG GTCAATATTC TTAGAAGTGG CGGCGTGATT GTGTATCCCA CCGACTCGGG GTATGCCCTG GGCTGCCTGA TTGGCGATAA AAACGCCATG GAGCGTATCG TGCGAATTCG TCAGATGGAG CAGGATCATC ACTTCTCTTT GATGTGCCGT GACCTGTCTG AAATTGCGAC CTACGCCAGG GTCGAGAATC AGGCCTTCCG CTTGGTGAAA CACTGCACGC CCGGGCCTTA CACCTTTATT TTCAAGGCCA CCAAAGAAGT ACCGCGCCGT TTGCAAAACG ACAAGAAGAA AACCATTGGT ATCCGCGTGC CCGACAACGT GATAGCCCTG GCACTGCTCG AAGCACTCGG TGAGCCTTTA ATGTCCACCA GTTTGGTGAT GCCCGGCCAG GAGTTCGCCG AATCGGATCC TGAACATATC CGCGACCTGC TCGAACACCA GGTTGAGGCT ATTCTCAATG GTGGTTACCT CGGTGAGAGT CCGACCACTG TGGTGGATAT GTCGGAAGAC ACCTTCGAGG TGCTCCGGGA AGGCGCCGGG GATATCAGTC CGTTTCTGTA A
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Protein sequence | MSQFFYVHEV NPQKRLIDQA VNILRSGGVI VYPTDSGYAL GCLIGDKNAM ERIVRIRQME QDHHFSLMCR DLSEIATYAR VENQAFRLVK HCTPGPYTFI FKATKEVPRR LQNDKKKTIG IRVPDNVIAL ALLEALGEPL MSTSLVMPGQ EFAESDPEHI RDLLEHQVEA ILNGGYLGES PTTVVDMSED TFEVLREGAG DISPFL
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