| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2069 |
|---|
| Symbol | |
|---|
| ID | 4604319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2504835 |
|---|
| End bp | 2505251 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639781446 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_927944 |
|---|
| Protein GI | 119775204 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.180128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATCGTC AGGAGAGTCT TGGTTATTTG GTGTCCCATC TCAATGTGGC CATTGCCAAT
GAGCTGGATC AACGCCTGAA GCGCTATCAG CTGGACATTA AACTCTGGCC GGTATTGTTT
GCGCTTTGGC AGGAAGAAGG CATTACCCAA ACCGAATTGT CACGTCGCTG CGACGTGGCC
AACTACACCA TGACCCGGCT GTTGGATCAA CTGCAGGTAC AGGGACTCAT CACGCGGCAT
CAGGAAGCGG ATAATCGCCG CGCCTTCAAG ATTTTTCTAA CAGACGAAGC CAAAGCCCTT
GAGCAGGACC TTATCCGTGA AGCGGAGCGG GTGAATGAAA AGTTTATGGC CGAGCTGAAC
GTGGAAGAGC AAGATTTGCT GATGAAATTG CTGAACAAGA TAAATCACAC TGAGTGA
|
|---|
| Protein sequence | MNRQESLGYL VSHLNVAIAN ELDQRLKRYQ LDIKLWPVLF ALWQEEGITQ TELSRRCDVA
NYTMTRLLDQ LQVQGLITRH QEADNRRAFK IFLTDEAKAL EQDLIREAER VNEKFMAELN
VEEQDLLMKL LNKINHTE
|
|---|
| |