| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2040 |
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| Symbol | |
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| ID | 4604290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2477769 |
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| End bp | 2478557 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781417 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_927915 |
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| Protein GI | 119775175 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.231203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTATCG ATTCCCATTG TCACCTCGAC AGATTAAAAG CCGCCCCCTG TGATGCGTCT
TTGGCAGATA TGCTCAAAGG CGCCAAGGAG AGGGGTGTTG ACTATGTGCT CTGTGTCAAC
GTCCGTCAGA AGGGATTTGA ATCCATGTGT GCCAGGGTCG AGCAATTTGA CAATGTGTTT
CTGTCCAGTG GCGTGCATCC ATTGGATGTA AAAGAAGGCC TGGATCTGAA CGAGCTCAAA
GAGTTTGCGG CCCATCCCCG GGTGGTGGCT ATTGGTGAAA CCGGCTTGGA TTACTATTAC
GCCGATGACA GTCGCGAGTT GCAAATGCAG TGTTTTGAGC AGCAAATCGC GCTGGCCCGT
GATGTTAATA AGCCACTGAT TGTTCATACC CGGGATGCCC GCGAAGATAC CATCAGACTC
CTGAAAGAGG GCGGTGCCGA TACCGTGGGT GGGGTGCTGC ATTGTTTTAC CGAAAACTGG
GAAATGGCCA AGGCAGCCAT GGATCTGGGC TTTTATATTT CGGTATCCGG GATAGTGACC
TTCAAAAATG CTGCCGAGCT CAGGGACGTA ATCCGCAAGG TACCCAAGGA CCGTCTGCTG
GTTGAAACTG ACTCACCTTA TTTGGCACCG GTTCCTCATC GTGGTCAGGA AAACCAACCC
GCCTATGTTC GCGATGTCGC TGAATTTGTG GCAGAACTGC GTGGTGAAAA ATTCCCCGAA
CTTGCTGAGT TCACCACGAA TAACTTCTTT ACCCTCTTTA AGGATGCTGC CCGTTTGGCT
GGTCGCTGA
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| Protein sequence | MLIDSHCHLD RLKAAPCDAS LADMLKGAKE RGVDYVLCVN VRQKGFESMC ARVEQFDNVF
LSSGVHPLDV KEGLDLNELK EFAAHPRVVA IGETGLDYYY ADDSRELQMQ CFEQQIALAR
DVNKPLIVHT RDAREDTIRL LKEGGADTVG GVLHCFTENW EMAKAAMDLG FYISVSGIVT
FKNAAELRDV IRKVPKDRLL VETDSPYLAP VPHRGQENQP AYVRDVAEFV AELRGEKFPE
LAEFTTNNFF TLFKDAARLA GR
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