| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2021 |
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| Symbol | ushA |
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| ID | 4604271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2456354 |
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| End bp | 2458069 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781398 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_927896 |
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| Protein GI | 119775156 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000125326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACATA AACTGATGAA AGGATTGCTT GCCACTGCGG TACTGGCTGC TCTAACCGGC
TGTATGGATG CCGATCCGAA AGAGCCGGTT GTACCAACGA CCTGCGCTGA AGCCGGCGAT
GCCTGTAAGA CCTTCACTGT GCTGCATACC AACGACAACC ACGGTCGTTT CTGGGAAAAC
AAGGACGGTG AGTACGGCAT GGCTGCCCGT AAGGCGCTGA TTGACCAGAT CCGCGGTGAA
GTGGAAGGCA ATGGCGGCGA AGTGCTGCTG CTTTCCGGTG GTGACATTAA TACCGGCGTA
CCCGAGTCCG ATCTGCAGGA TGCAGTCCCT GATTTTATCG GTATGACCAA GATTGGTTAC
GATGCCATGG CTGTGGGTAA CCACGAGTTT GATAACCCAC TGAATATCCT TGATATGCAA
CGCCAGCTGG CTGACTTCCC ATTCCTGTCT GCCAACATCT ACAAGGCCGA TGGTACCCGC
TACTTCGATG CTTATAAGGT GTTCGACGTG AACGGTGTCC GTATCGCTGT TGTGGGTCTG
ACCACAGAAG ACACTGCCAA GATTGGCAAT CCTGAATTTA TCAGTGAACT GACCTTTACC
GATCCAAAAG AAGAAGTGGC CAAAGTTATC AAGGAAATCA AAGACGGCGA TAAGGCCGAT
ATGATTTTCG CCGTGACTCA CATGGGTCAC TATGCTGATG CACAAAACGG CAGCAATGCT
CCTGGCGATG TGGCCATGGC TCGCAGCCTG AACAAGGGCG ATCTGCAACT GGTGATTGGT
GGTCACTCTC AAAACCCAGT GTGTATGGAG CCCGGTACCA ACAATTACGC CGATTTCAAA
GCGGGTGATG AATGTACCCC TGATCAGCAA AACGGTACCT GGATCATGCA GGCTCATGAG
TGGGGCAAGT ATGTTGGCCG TGCCGACTTT GAATACTTCA ATGGTGAACT GCACCTGGCT
GGTTACAAGC TCATCCCGGT TAACCTGAAG AAAACCGTTG AGGATGAGTC AGGCAACAAG
AGTAAGGTAC TGGTAGGTGA TGCCATTACC CCGGATGCCG AGCTGAAAGA GCTGCTGCAG
TACTATCAGG ATAAAGGTCA GGCTTCTTTG GATGAAGTGA TTGCTACCAC AGACGATAAG
CTGGAAGGCG ATCGCACTAT GGTACGTGGT CAGCAAACCA ACCTGGGCCG TCTGCTTGCC
ATGGCACAGT CTGTAAAAGT GAATGCCGAC GTGGGTGTAA TGAACTCAGG CGGTGTGCGT
GCCTCCATCG CGGCCGGTGA TATCTCTTAC CGTGACGTAC TGACTGTACA GCCATTTGGC
AACATGGTGA CCTTAAGCAC CATGACAGGC GCCGAGCTGA CTGAGTACCT GGGCGCCGTT
GCCTCTATGC AGCGTGGTTC AGGTGCATAC GCTCAAATCA CCGGTGTGAA AATGACAGTG
GATTGTACTG CCAAAACCGT GGCCATCAGC GATGTAAACG GTAAAGGTTA CGATGCCGGT
GCCTCTTACA CCTTTACTGT TCCAAGCTTC AACGCCGCTG GCGGTGATGG CTACCCAGTA
CTGGCGCCTG TTCAAACAGG TTATGTAGAT GCCGACGTGC TGTACGACTT CTTCAAGCAG
AAGGGCAGCA TCAAGGCCGC CGATTACAAC CCTATGGGTG ACATCGTTTA CGAAAACTCC
AACAGCCCAC TGGGTTGTGA AGTGACTGCT CAGTAA
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| Protein sequence | MSHKLMKGLL ATAVLAALTG CMDADPKEPV VPTTCAEAGD ACKTFTVLHT NDNHGRFWEN
KDGEYGMAAR KALIDQIRGE VEGNGGEVLL LSGGDINTGV PESDLQDAVP DFIGMTKIGY
DAMAVGNHEF DNPLNILDMQ RQLADFPFLS ANIYKADGTR YFDAYKVFDV NGVRIAVVGL
TTEDTAKIGN PEFISELTFT DPKEEVAKVI KEIKDGDKAD MIFAVTHMGH YADAQNGSNA
PGDVAMARSL NKGDLQLVIG GHSQNPVCME PGTNNYADFK AGDECTPDQQ NGTWIMQAHE
WGKYVGRADF EYFNGELHLA GYKLIPVNLK KTVEDESGNK SKVLVGDAIT PDAELKELLQ
YYQDKGQASL DEVIATTDDK LEGDRTMVRG QQTNLGRLLA MAQSVKVNAD VGVMNSGGVR
ASIAAGDISY RDVLTVQPFG NMVTLSTMTG AELTEYLGAV ASMQRGSGAY AQITGVKMTV
DCTAKTVAIS DVNGKGYDAG ASYTFTVPSF NAAGGDGYPV LAPVQTGYVD ADVLYDFFKQ
KGSIKAADYN PMGDIVYENS NSPLGCEVTA Q
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