Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1984 |
Symbol | rpmF |
ID | 4604234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2412348 |
End bp | 2412518 |
Gene Length | 171 bp |
Protein Length | 56 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639781361 |
Product | 50S ribosomal protein L32 |
Protein accession | YP_927859 |
Protein GI | 119775119 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0333] Ribosomal protein L32 |
TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000709039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000595562 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTGTAC AACAGAACAA AAAATCTCGT TCAAAGCGCG GTATGCGCCG TTCACATGAC GCTCTGAGCA CTGCTCAGCT GTCAGTAGAC GCTACCAGCG GTGAACTGCA TCTGCGTCAC AATGTGACCG CTGATGGTTA CTACCGTGGT AAGAAGGTTA TCAACAAGTA A
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Protein sequence | MAVQQNKKSR SKRGMRRSHD ALSTAQLSVD ATSGELHLRH NVTADGYYRG KKVINK
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