Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1944 |
Symbol | |
ID | 4604194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2372250 |
End bp | 2373317 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781321 |
Product | imidazole glycerol-phosphate dehydratase/histidinol phosphatase |
Protein accession | YP_927819 |
Protein GI | 119775079 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase [COG0241] Histidinol phosphatase and related phosphatases |
TIGRFAM ID | [TIGR01261] histidinol-phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGA AAATGCTTTT TATCGACCGC GATGGCACCC TGATTGAGGA GCCGGTAACA GATAAGCAGG TCGACAGTCT CAGCAAGCTG GTGTTTGAAC CAACCGCCAT TCCCGCGCTG CTGCGGCTGC AAAAAGCCGG TTACCGCCTG ATTATGGTCA GTAATCAGGA TGGCCTCGGC ACCCCATCTT TCCCTCAGGA AGACTTTGAC GCCCCCCACA ACCTGATGAT GCAGGTTTTT GAAAGTCAGG GCGTTAAGTT TGATGAGGTG CTGATTTGCC CGCACTTCAA CGATGAAAAC TGCAGCTGCC GGAAGCCCAA ACTCGGTCTG GTAAAATCCT TCCTGACCCA AGGTCTGGTG GATTTTACCG CCTCAGCAGT GATTGGCGAT CGCGACACCG ATGTCGAACT TGGCAACGCC ATGGGCATCA AGAGCTTTAA GTATCAGCGT GAAACCCTCG GCTGGAACGC CATTGCCGAT TCGCTGCTCG CCAAAGGCCG CTGCGCCACC GTTGTGCGCA CGACCCGCGA AACCGACATT AGGGTCACGG TGGATTTAGA CACCCCGGGC AACAATCAAA TCGACACCGG CATCGGCTTT TTTGACCATA TGCTTGATCA AATCGCCACC CACGGTAATT TCAGCCTCAA GCTTAACGTC GATGGCGACC TTGAGATTGA CGATCACCAC AGTGTGGAAG ACACAGCATT GGCCTTGGGT GATGCCCTGC GTCAGGCCCT TGGAGATAAG CGCGGCATCG GCCGTTTCGG CTTTGCCCTG CCGATGGATG AAGCCTCGGG CCAGTGTTTG ATGGATATCT CAGGTCGGCC TTTTATCAAG TTTGAGGCGA GCTTTAGCCG CGATAAAGTG GGCGAAATGG CCACCGAAAT GGTGCCGCAC TTCTTTCGCT CCTTCGCCGA TGGTCTGCGC TGCACCTTAC ACATCGGCTG CGATGGCGAT AACGATCACC ACAAGGTAGA AGCCCTGTTC AAGGTGCTTG GCCGCACCCT ACGCCAGGCC ATTGCCATCG AAGGTGATGC CCTGCCATCG TCAAAAGGAG TGCTTTGA
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Protein sequence | MPQKMLFIDR DGTLIEEPVT DKQVDSLSKL VFEPTAIPAL LRLQKAGYRL IMVSNQDGLG TPSFPQEDFD APHNLMMQVF ESQGVKFDEV LICPHFNDEN CSCRKPKLGL VKSFLTQGLV DFTASAVIGD RDTDVELGNA MGIKSFKYQR ETLGWNAIAD SLLAKGRCAT VVRTTRETDI RVTVDLDTPG NNQIDTGIGF FDHMLDQIAT HGNFSLKLNV DGDLEIDDHH SVEDTALALG DALRQALGDK RGIGRFGFAL PMDEASGQCL MDISGRPFIK FEASFSRDKV GEMATEMVPH FFRSFADGLR CTLHIGCDGD NDHHKVEALF KVLGRTLRQA IAIEGDALPS SKGVL
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