Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1942 |
Symbol | hisD |
ID | 4604192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2369838 |
End bp | 2371145 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781319 |
Product | histidinol dehydrogenase |
Protein accession | YP_927817 |
Protein GI | 119775077 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCT TGGTCTGGAA CACCTTAAGC GAGGATGCCA AGCGCCAGGC GCTGTCCCGC TCACCTCTGG TGGGGGATGA TAGTCTGGCG ACATCCGTCA GTGACATTCT TTGCAATGTG AAGCGTCGCG GCGACAGCAC CCTGATTGAA TACGCGGCGC GCTTCGATAA AGCCGAAATC GATACGCTGG CGCTGAGTGC GGACGAAATC GCAGCAGCCT GCGAGCGTGT AAGCCCTGAG CTTAAAGACG CCATCAACGC CGCCCGCACC AACATTGCCC GTTTTCATAG CGCCCAGCAG TTCAGCGAAA TCAGCCTGGA GACCCAACCG GGAGTTCGCT GCGAGCTTAA AAGTGAGGCC ATTGAAAAGG TGGGGCTTTA TATTCCGGGC GGTAGTGCCC CCCTTATCAG CACAGTGTTG ATGTTGGCCG TGCCTGCCGC TATCGCTGGT TGTACCAAGC GGGTACTGGT AAGCCCACCG CCCATTGATG ACGCCATTCT TTATGCTGCC AGCGTGTGCG GCATTACCGA TGTGTTCCAG ATAGGCGGCG CCCAGGCCAT TGCGGCGCTC GCCTACGGCA CTGAGAGCGT ACCAAAAGTG GACAAGATTT TTGGGCCCGG CAATCGTTAC GTGACCGAAG CCAAGGCCCA GGTGGCAAGG GATACCCAGG CTGCCGTCAC CATCGACATG CCAGCCGGTC CTTCCGAAGT GCTGGTGATT GCCGATGATG CCGCCAACCC CGAGTTTATC GCAGCAGACC TCTTGTCTCA GGCCGAGCAC GGCAGTGACT CACAGGTGAT TTTTGTCACC GACTCCCGCA CCCAGGCAAA CGCGGTTGAA GCGGCCCTTG AGCGCCAGCT CACCCTGCTG CCCAGAAGAG AAACTGCAGA AGGGGCGCTG TCATGCAGCC GTATTATCAT TACTGCCACC CTGGATGAGG CGGCAATCGT GTCTAACCTC TATGCCCCTG AGCACCTCAT TATTCAAACC AGAGAGCCAA GGGCGCTGCT GCCACGTATT CGTGCGGCTG GGTCCGTATT TTTAGGCGCC TATACGCCGG AATCGGTTGG CGACTATGCC TCCGGCACCA ACCACGTGCT GCCCACTTAC GGTTACAGTA AGACCGTCTC CAGTTTGTCG CTGGCCGATT TTTGCCGCCG CTTTACCGTG CAGGAGTTGA GTGCAGAAGG ACTGAAGGGA CTCGGTCAAA CCGTGATGAC TCTGGCTGCG GCCGAGTCGC TGGATGCCCA CAAAAATGCA GTAAAAGTCA GGCTTGATGC CATCGCACGT GAGGAGAATC GTCAATGA
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Protein sequence | METLVWNTLS EDAKRQALSR SPLVGDDSLA TSVSDILCNV KRRGDSTLIE YAARFDKAEI DTLALSADEI AAACERVSPE LKDAINAART NIARFHSAQQ FSEISLETQP GVRCELKSEA IEKVGLYIPG GSAPLISTVL MLAVPAAIAG CTKRVLVSPP PIDDAILYAA SVCGITDVFQ IGGAQAIAAL AYGTESVPKV DKIFGPGNRY VTEAKAQVAR DTQAAVTIDM PAGPSEVLVI ADDAANPEFI AADLLSQAEH GSDSQVIFVT DSRTQANAVE AALERQLTLL PRRETAEGAL SCSRIIITAT LDEAAIVSNL YAPEHLIIQT REPRALLPRI RAAGSVFLGA YTPESVGDYA SGTNHVLPTY GYSKTVSSLS LADFCRRFTV QELSAEGLKG LGQTVMTLAA AESLDAHKNA VKVRLDAIAR EENRQ
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