| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1940 |
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| Symbol | |
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| ID | 4604190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2366483 |
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| End bp | 2368480 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781317 |
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| Product | ATP-dependent helicase DinG |
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| Protein accession | YP_927815 |
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| Protein GI | 119775075 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.497186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTTCCC AATCCGCTGC CAACAACCTG ATAACCCGCA CACAGGCCGT CTTCGATGAA
GGTGGGCTGC TGTCGCGTTT TATCCGCGGT TACCGGCGTC GTGAGGTGCA GCAGCAGATG
GCTGAGGAAG TGGCGTCCTG CTTGAGTCAT ACCCATAAGC TGGTGCTCGA GGCGGGCACC
GGTGTGGGAA AAACCTTTGC TTATCTGGTG CCCGCGCTTT TAAGTGGCAA GCAGGTCATT
GTCAGTACCG GCAGTAAAAA TCTGCAGGAG CAGCTCTTTT ATAAAGACTT ACCAGCCCTG
TTGGAGATGC TTAAGCTCCA CCTGCCAGTG AGCATTTTAA AGGGCCGCAG CAATTATTTG
TGCCAGCGGC TGATGGCAGC ACAAATGGAA GCGGCTTTCA GTCACGATGA GAAGCTTTTG
GATGATTTGC TCAAACTCAA TCAGTTTGCG CAAACCACTG AAGATGGCGA CCTTGGCAAT
CTGACCGGAG TGGCCGAAGA TGCCCGTGCC ATCAGTTTGG TAGCCAGCAC ACAGGATAGC
TGCACCGGCC AGCGCTGCGC CTTCTATGAA GATTGCTTTA CCCGGAAAGC CCGCGCCCGC
GCGATGAATG CTCGCTTGAT TGTGGTGAAC CATCATCTGT TTTTTGCAGA CAGGGTATTG
AAAGACACAG GCTTTGCCGA ACTCTTACCC GATGTGGATG CGGTGATTTT CGATGAGGCG
CACCTGCTAC CTGATATCGC TATGCAGTAT TTTGGCGCTC AGCTTTCTAC CGGCAGCCTG
CGGCGGCTGC TGGACGGGAT AGAGCGGCTT ACCGAAGGCG AGCTTGGCGA TACCCAGGGA
CTTAAGCTGT TGCCACAACG TGCCCGGATT AAGTTGGATG CCTGGCAAAA TTGCTTGTTG
GATGCTGGCA GCAGTGATTT TCGGCAACTG CTGAAAGATA AGACGGCGGC GCTGGCGGCA
GGCGAGCTGA TTGCCGAGTT ATCGGCACTG GAAGCCTTGC TGCTTGCCAA TGTGGGCCGC
AGTGAGCCAC TTGATGACTT TGCCGTTAAG CTGCCGGAGC TTAAGCAAAA GCTTGAGCGC
TTCATTGCCT GTGACGATCC GGGCTCTGCC TACAGCATAG ATATCGGTGA GCGTCATCTG
ATGCTGCGTA TTTCACCCAT CGACATCGCG AAGGCGTGCA GCGAGTTGTT CAGCGAAGAC
ACCGCCTGGG TGTTTACCTC TGCGACCTTG CAGGTGGAAC GAAGCCTGCA ATTTTTTACC
CGAGAGCTTG GGCTGACTTC TGCGAAGCCT GTATCAGCTA AACGCAGCCA ATCCGGGGCA
GGTGCCAAAT CCGCAGTGTG TAAAGAAGTG CTGCTCGACA GTCCCTTTGA TTACCCCAGG
CAATCGCTTT TGTGCGTGCC GCGCCGTTTA GGCAGTGTGG CCAATCAGGA CGCTATGGTG
TGCCAGCTCA CCGAGGTATG CCTCAAGCTG ATCAGGGCCG CCAAGGGCCG CACCTTTATC
CTCTTTACCA GTCACAGGAT GATGGAGGCC GTGGCGCGCT CGTTGGTGGG CCGCTGCCAT
TACCCTTTGC TTGTGCAGGG GCAGGGCGGT AAGCAGCAAT TGCTGTCCAA ATTCAGACAG
TTGGGAGAGG CCGTGCTGCT TGGCACTGGC AGCTTTTGGG AAGGGGTTGA CGTGCGTGGT
AAGCTGCTGT CGTGCGTCAT TATCGATAAG CTCCCCTTTG CTTCGCCGGA TGACAGTCTC
TACAAAGCCC GCGCCAGTCG GGTTGAGGCC AGAGGTGGCG ATCCCTTTCT GGAAATTTCG
CTGCCCCAGG CGGTGATTGC GCTGAAACAG GGGGCTGGCA GGCTTATCCG CGATGAAACC
GACCGTGGGG TACTGGTGAT CTGCGATAAC CGCCTGGTCA ACCGGCCCTA TGGTCAGGCA
TTTTTGCAAT CGCTGCCGCC CATGGCCCGC ACCCGTGATT TGGATGAGGC CTGCGCTTTT
TTAGCCGCTA TTGACTGA
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| Protein sequence | MSSQSAANNL ITRTQAVFDE GGLLSRFIRG YRRREVQQQM AEEVASCLSH THKLVLEAGT
GVGKTFAYLV PALLSGKQVI VSTGSKNLQE QLFYKDLPAL LEMLKLHLPV SILKGRSNYL
CQRLMAAQME AAFSHDEKLL DDLLKLNQFA QTTEDGDLGN LTGVAEDARA ISLVASTQDS
CTGQRCAFYE DCFTRKARAR AMNARLIVVN HHLFFADRVL KDTGFAELLP DVDAVIFDEA
HLLPDIAMQY FGAQLSTGSL RRLLDGIERL TEGELGDTQG LKLLPQRARI KLDAWQNCLL
DAGSSDFRQL LKDKTAALAA GELIAELSAL EALLLANVGR SEPLDDFAVK LPELKQKLER
FIACDDPGSA YSIDIGERHL MLRISPIDIA KACSELFSED TAWVFTSATL QVERSLQFFT
RELGLTSAKP VSAKRSQSGA GAKSAVCKEV LLDSPFDYPR QSLLCVPRRL GSVANQDAMV
CQLTEVCLKL IRAAKGRTFI LFTSHRMMEA VARSLVGRCH YPLLVQGQGG KQQLLSKFRQ
LGEAVLLGTG SFWEGVDVRG KLLSCVIIDK LPFASPDDSL YKARASRVEA RGGDPFLEIS
LPQAVIALKQ GAGRLIRDET DRGVLVICDN RLVNRPYGQA FLQSLPPMAR TRDLDEACAF
LAAID
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