Gene Sama_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1931 
Symbol 
ID4604181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2358331 
End bp2359140 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content51% 
IMG OID639781308 
Productseptum site-determining protein MinD 
Protein accessionYP_927806 
Protein GI119775066 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000172441 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA TTATTGTTGT CACTTCCGGA AAAGGCGGCG TAGGTAAAAC CACATCAAGT 
GCCGCCATTG CCACAGGTTT GGCCCTCCGT GGTCATAAAA CTGTGGTGAT AGACTTTGAT
ATCGGGCTGC GTAACCTTGA CCTTATCATG GGCTGCGAGC GCCGGGTAGT ATATGATTTT
GTTAACGTAA TCAATGGTGA AGCCAATCTT AATCAGGCAA TGATCAAAGA CAAGCGCAGT
GAAAATCTGT TTGTACTGCC AGCTTCGCAA ACCCGCGATA AAGATGCCCT CACCCGCGAA
GGTGTCGGCA GAGTACTGGA TGACCTCGCC AAAGACTTTG AATACATCGT CTGTGATTCG
CCAGCCGGCA TCGAGACAGG CGCCCTGATG GCACTGTATT TCGCCGATAT CGCGATTGTT
ACCACTAACC CTGAAGTCAG CTCAGTGCGT GACTCTGACC GCATTCTTGG CATACTGCAA
AGCAAGTCAC GCAGGGCTGA GCAAAATCTT GAGCCAATCA AGGAATACTT GCTGCTGACT
CGCTACTCCC CAACCCGGGT GAAAAATGGT GAGATGCTGA GCGTCGCAGA TGTTGAAGAC
ATTCTGGCCA TCGATTTGCT GGGCGTGATC CCCGAGTCTC AGGCCGTACT TAAGGCGTCG
AACTCCGGGG TCCCTGTGAT TGTTGACCAG GAAAGTGACG CTGGTCAGGC GTACAGTGAT
ACCGTTGCCC GTTTGTTGGG TGAAGAACTC CCACTTCGCT TCGTCACCGA AGAGAAGAAG
GGCCTGTTGA AAAGGATTTT TGGTAGCTGA
 
Protein sequence
MAQIIVVTSG KGGVGKTTSS AAIATGLALR GHKTVVIDFD IGLRNLDLIM GCERRVVYDF 
VNVINGEANL NQAMIKDKRS ENLFVLPASQ TRDKDALTRE GVGRVLDDLA KDFEYIVCDS
PAGIETGALM ALYFADIAIV TTNPEVSSVR DSDRILGILQ SKSRRAEQNL EPIKEYLLLT
RYSPTRVKNG EMLSVADVED ILAIDLLGVI PESQAVLKAS NSGVPVIVDQ ESDAGQAYSD
TVARLLGEEL PLRFVTEEKK GLLKRIFGS